Analysis of interatomic Contacts of Structural Units in PDB entry:
8HYA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HYA entry

There are 2 chains in PDB entry 8HYA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 32VAL 1048
B
 SER 32VAL 1048
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 8HYA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 54Right-handed alpha
Helix 2
AA2
A
60 77Right-handed alpha
Helix 3
AA3
A
84 94Right-handed alpha
Helix 4
AA4
A
97 114Right-handed alpha
Helix 5
AA5
A
118 125Right-handed alpha
Helix 6
AA6
A
125 151Right-handed alpha
Helix 7
AA7
A
157 168Right-handed alpha
Helix 8
AA8
A
172 183Right-handed alpha
Helix 9
AA9
A
187 213Right-handed alpha
Helix 10
AB1
A
221 254Right-handed alpha
Helix 11
AB2
A
257 279Right-handed alpha
Helix 12
AB3
A
283 299Right-handed alpha
Helix 13
AB4
A
306 339Right-handed alpha
Helix 14
AB5
A
344 348Right-handed 310
Helix 15
AB6
A
349 377Right-handed alpha
Helix 16
AB7
A
384 394Right-handed alpha
Helix 17
AB8
A
398 409Right-handed alpha
Helix 18
AB9
A
419 450Right-handed alpha
Helix 19
AC1
A
457 482Right-handed alpha
Helix 20
AC2
A
492 500Right-handed alpha
Helix 21
AC3
A
527 550Right-handed alpha
Helix 22
AC4
A
553 568Right-handed alpha
Helix 23
AC5
A
569 571Right-handed 310
Helix 24
AC6
A
576 582Right-handed alpha
Helix 25
AC7
A
583 585Right-handed 310
Helix 26
AC8
A
590 594Right-handed 310
Helix 27
AC9
A
602 638Right-handed alpha
Helix 28
AD1
A
640 654Right-handed alpha
Helix 29
AD2
A
655 668Right-handed alpha
Helix 30
AD3
A
670 699Right-handed alpha
Helix 31
AD4
A
704 723Right-handed alpha
Helix 32
AD5
A
731 739Right-handed alpha
Helix 33
AD6
A
740 744Right-handed 310
Helix 34
AD7
A
810 817Right-handed alpha
Helix 35
AD8
A
837 844Right-handed alpha
Helix 36
AD9
A
846 866Right-handed alpha
Helix 37
AE1
A
866 871Right-handed alpha
Helix 38
AE2
A
874 884Right-handed alpha
Helix 39
AE3
A
1031 1042Right-handed alpha
Helix 40
AE4
B
33 54Right-handed alpha
Helix 41
AE5
B
60 77Right-handed alpha
Helix 42
AE6
B
84 94Right-handed alpha
Helix 43
AE7
B
97 114Right-handed alpha
Helix 44
AE8
B
118 125Right-handed alpha
Helix 45
AE9
B
125 151Right-handed alpha
Helix 46
AF1
B
157 168Right-handed alpha
Helix 47
AF2
B
172 183Right-handed alpha
Helix 48
AF3
B
187 213Right-handed alpha
Helix 49
AF4
B
221 254Right-handed alpha
Helix 50
AF5
B
257 279Right-handed alpha
Helix 51
AF6
B
283 299Right-handed alpha
Helix 52
AF7
B
306 339Right-handed alpha
Helix 53
AF8
B
344 348Right-handed 310
Helix 54
AF9
B
349 377Right-handed alpha
Helix 55
AG1
B
384 394Right-handed alpha
Helix 56
AG2
B
398 409Right-handed alpha
Helix 57
AG3
B
419 450Right-handed alpha
Helix 58
AG4
B
457 482Right-handed alpha
Helix 59
AG5
B
492 500Right-handed alpha
Helix 60
AG6
B
527 550Right-handed alpha
Helix 61
AG7
B
553 568Right-handed alpha
Helix 62
AG8
B
569 571Right-handed 310
Helix 63
AG9
B
576 582Right-handed alpha
Helix 64
AH1
B
583 585Right-handed 310
Helix 65
AH2
B
590 594Right-handed 310
Helix 66
AH3
B
602 638Right-handed alpha
Helix 67
AH4
B
640 654Right-handed alpha
Helix 68
AH5
B
655 668Right-handed alpha
Helix 69
AH6
B
670 699Right-handed alpha
Helix 70
AH7
B
704 723Right-handed alpha
Helix 71
AH8
B
731 739Right-handed alpha
Helix 72
AH9
B
740 744Right-handed 310
Helix 73
AI1
B
810 817Right-handed alpha
Helix 74
AI2
B
837 844Right-handed alpha
Helix 75
AI3
B
846 866Right-handed alpha
Helix 76
AI4
B
866 871Right-handed alpha
Helix 77
AI5
B
874 884Right-handed alpha
Helix 78
AI6
B
1031 1042Right-handed alpha
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There are 8 sheets in PDB entry 8HYA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
761 762first strand
Strand 2
A
830 836anti-parallel
Strand 3
A
777 783anti-parallel
Strand 4
A
807 809anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
802 803first strand
Strand 2
A
786 789anti-parallel
Strand 3
A
823 825anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
889 892first strand
Strand 2
A
965 970anti-parallel
Strand 3
A
905 910anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
913 914first strand
Strand 2
A
960 961anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
761 762first strand
Strand 2
B
830 836anti-parallel
Strand 3
B
777 783anti-parallel
Strand 4
B
807 809anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
802 803first strand
Strand 2
B
786 789anti-parallel
Strand 3
B
823 825anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
889 892first strand
Strand 2
B
965 970anti-parallel
Strand 3
B
905 910anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
913 914first strand
Strand 2
B
960 961anti-parallel
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