Analysis of interatomic Contacts of Structural Units in PDB entry:
8HYH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HYH entry

There is 1 chain in PDB entry 8HYH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8HYH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 29Right-handed alpha
Helix 2
AA2
A
40 44Right-handed 310
Helix 3
AA3
A
46 54Right-handed alpha
Helix 4
AA4
A
60 68Right-handed alpha
Helix 5
AA5
A
78 85Right-handed 310
Helix 6
AA6
A
96 99Right-handed 310
Helix 7
AA7
A
100 111Right-handed alpha
Helix 8
AA8
A
118 120Right-handed 310
Helix 9
AA9
A
129 148Right-handed alpha
Helix 10
AB1
A
149 153Right-handed 310
Helix 11
AB2
A
176 189Right-handed alpha
Helix 12
AB3
A
199 211Right-handed alpha
Helix 13
AB4
A
212 214Right-handed 310
Helix 14
AB5
A
220 230Right-handed alpha
Helix 15
AB6
A
250 256Right-handed alpha
Helix 16
AB7
A
267 271Right-handed 310
Helix 17
AB8
A
300 304Right-handed 310
Helix 18
AB9
A
305 336Right-handed alpha
Helix 19
AC1
A
336 341Right-handed alpha
Helix 20
AC2
A
352 360Right-handed alpha
Helix 21
AC3
A
365 370Right-handed alpha
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There are 2 sheets in PDB entry 8HYH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
32 36parallel
Strand 3
A
2 5parallel
Strand 4
A
70 72parallel
Strand 5
A
90 93parallel
Strand 6
A
113 116parallel
Strand 7
A
343 346anti-parallel
Strand 8
A
349 350anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 218first strand
Strand 2
A
192 197parallel
Strand 3
A
169 173parallel
Strand 4
A
233 236parallel
Strand 5
A
262 265parallel
Strand 6
A
293 296parallel
Strand 7
A
287 290anti-parallel
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