Analysis of interatomic Contacts of Structural Units in PDB entry:
8HYK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HYK entry

There is 1 chain in PDB entry 8HYK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2HIS 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8HYK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 12Right-handed alpha
Helix 2
AA2
A
22 37Right-handed alpha
Helix 3
AA3
A
38 42Right-handed 310
Helix 4
AA4
A
52 56Right-handed alpha
Helix 5
AA5
A
85 90Right-handed 310
Helix 6
AA6
A
97 114Right-handed alpha
Helix 7
AA7
A
175 189Right-handed alpha
Helix 8
AA8
A
192 211Right-handed alpha
Helix 9
AA9
A
220 230Right-handed alpha
Helix 10
AB1
A
233 238Right-handed alpha
Helix 11
AB2
A
241 259Right-handed alpha
Helix 12
AB3
A
260 265Right-handed 310
Helix 13
AB4
A
282 298Right-handed alpha
Helix 14
AB5
A
302 306Right-handed 310
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There are 2 sheets in PDB entry 8HYK. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 51first strand
Strand 2
A
66 79anti-parallel
Strand 3
A
134 146parallel
Strand 4
A
125 129anti-parallel
Strand 5
A
118 120anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 51first strand
Strand 2
A
66 79anti-parallel
Strand 3
A
134 146parallel
Strand 4
A
159 165anti-parallel
Strand 5
A
171 174anti-parallel
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