Analysis of interatomic Contacts of Structural Units in PDB entry:
8HZ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HZ5 entry

There are 2 chains in PDB entry 8HZ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2PHE 431
B
 ILE 2ALA 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8HZ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 24Right-handed alpha
Helix 2
AA2
A
35 37Right-handed 310
Helix 3
AA3
A
39 45Right-handed alpha
Helix 4
AA4
A
62 74Right-handed alpha
Helix 5
AA5
A
88 98Right-handed alpha
Helix 6
AA6
A
106 115Right-handed alpha
Helix 7
AA7
A
115 127Right-handed alpha
Helix 8
AA8
A
141 149Right-handed alpha
Helix 9
AA9
A
248 266Right-handed alpha
Helix 10
AB1
A
296 305Right-handed alpha
Helix 11
AB2
A
307 318Right-handed alpha
Helix 12
AB3
A
395 408Right-handed alpha
Helix 13
AB4
A
418 427Right-handed alpha
Helix 14
AB5
B
11 24Right-handed alpha
Helix 15
AB6
B
35 38Right-handed 310
Helix 16
AB7
B
39 45Right-handed alpha
Helix 17
AB8
B
62 74Right-handed alpha
Helix 18
AB9
B
88 98Right-handed alpha
Helix 19
AC1
B
106 115Right-handed alpha
Helix 20
AC2
B
115 125Right-handed alpha
Helix 21
AC3
B
248 267Right-handed alpha
Helix 22
AC4
B
297 305Right-handed alpha
Helix 23
AC5
B
307 316Right-handed alpha
Helix 24
AC6
B
324 328Right-handed 310
Helix 25
AC7
B
395 410Right-handed alpha
Helix 26
AC8
B
418 427Right-handed alpha
Helix 27
AC9
B
428 433Right-handed alpha
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There are 8 sheets in PDB entry 8HZ5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 52first strand
Strand 2
A
27 33parallel
Strand 3
A
4 7parallel
Strand 4
A
77 79parallel
Strand 5
A
101 102parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 228first strand
Strand 2
A
207 215anti-parallel
Strand 3
A
270 278anti-parallel
Strand 4
A
284 290anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 242first strand
Strand 2
A
333 340anti-parallel
Strand 3
A
385 393anti-parallel
Strand 4
A
366 370anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 359first strand
Strand 2
A
411 413anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 52first strand
Strand 2
B
27 33parallel
Strand 3
B
4 7parallel
Strand 4
B
77 79parallel
Strand 5
B
101 102parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 228first strand
Strand 2
B
206 215anti-parallel
Strand 3
B
272 279anti-parallel
Strand 4
B
284 290anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 242first strand
Strand 2
B
333 340anti-parallel
Strand 3
B
385 393anti-parallel
Strand 4
B
366 370anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 359first strand
Strand 2
B
411 413anti-parallel
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