Analysis of interatomic Contacts of Structural Units in PDB entry:
8HZX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8HZX entry

There are 6 chains in PDB entry 8HZX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	TYR 4	LEU 533
A	TYR 4	LEU 533
B	TYR 4	LEU 533
C	TYR 4	LEU 533
D	TYR 4	LEU 533
E	TYR 4	LEU 533

There are114 helices in PDB entry 8HZX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	14	21	Right-handed alpha
Helix 2	AA2	F	41	58	Right-handed alpha
Helix 3	AA3	F	73	86	Right-handed alpha
Helix 4	AA4	F	98	110	Right-handed alpha
Helix 5	AA5	F	120	126	Right-handed alpha
Helix 6	AA6	F	146	154	Right-handed alpha
Helix 7	AA7	F	189	205	Right-handed alpha
Helix 8	AA8	F	228	230	Right-handed 310
Helix 9	AA9	F	231	240	Right-handed alpha
Helix 10	AB1	F	250	262	Right-handed alpha
Helix 11	AB2	F	269	279	Right-handed alpha
Helix 12	AB3	F	280	285	Right-handed 310
Helix 13	AB4	F	300	309	Right-handed alpha
Helix 14	AB5	F	340	349	Right-handed alpha
Helix 15	AB6	F	395	402	Right-handed alpha
Helix 16	AB7	F	403	406	Right-handed 310
Helix 17	AB8	F	439	449	Right-handed alpha
Helix 18	AB9	F	483	493	Right-handed alpha
Helix 19	AC1	F	524	532	Right-handed alpha
Helix 20	AC2	A	14	21	Right-handed alpha
Helix 21	AC3	A	41	58	Right-handed alpha
Helix 22	AC4	A	73	86	Right-handed alpha
Helix 23	AC5	A	98	110	Right-handed alpha
Helix 24	AC6	A	120	126	Right-handed alpha
Helix 25	AC7	A	146	154	Right-handed alpha
Helix 26	AC8	A	189	205	Right-handed alpha
Helix 27	AC9	A	228	230	Right-handed 310
Helix 28	AD1	A	231	240	Right-handed alpha
Helix 29	AD2	A	250	262	Right-handed alpha
Helix 30	AD3	A	269	279	Right-handed alpha
Helix 31	AD4	A	280	285	Right-handed 310
Helix 32	AD5	A	300	309	Right-handed alpha
Helix 33	AD6	A	340	349	Right-handed alpha
Helix 34	AD7	A	395	402	Right-handed alpha
Helix 35	AD8	A	403	406	Right-handed 310
Helix 36	AD9	A	439	449	Right-handed alpha
Helix 37	AE1	A	483	493	Right-handed alpha
Helix 38	AE2	A	524	532	Right-handed alpha
Helix 39	AE3	B	14	21	Right-handed alpha
Helix 40	AE4	B	41	58	Right-handed alpha
Helix 41	AE5	B	73	86	Right-handed alpha
Helix 42	AE6	B	98	110	Right-handed alpha
Helix 43	AE7	B	120	126	Right-handed alpha
Helix 44	AE8	B	146	154	Right-handed alpha
Helix 45	AE9	B	189	205	Right-handed alpha
Helix 46	AF1	B	228	230	Right-handed 310
Helix 47	AF2	B	231	240	Right-handed alpha
Helix 48	AF3	B	250	262	Right-handed alpha
Helix 49	AF4	B	269	279	Right-handed alpha
Helix 50	AF5	B	280	285	Right-handed 310
Helix 51	AF6	B	300	309	Right-handed alpha
Helix 52	AF7	B	340	349	Right-handed alpha
Helix 53	AF8	B	395	402	Right-handed alpha
Helix 54	AF9	B	403	406	Right-handed 310
Helix 55	AG1	B	439	449	Right-handed alpha
Helix 56	AG2	B	483	493	Right-handed alpha
Helix 57	AG3	B	524	532	Right-handed alpha
Helix 58	AG4	C	14	21	Right-handed alpha
Helix 59	AG5	C	41	58	Right-handed alpha
Helix 60	AG6	C	73	86	Right-handed alpha
Helix 61	AG7	C	98	110	Right-handed alpha
Helix 62	AG8	C	120	126	Right-handed alpha
Helix 63	AG9	C	146	154	Right-handed alpha
Helix 64	AH1	C	189	205	Right-handed alpha
Helix 65	AH2	C	228	230	Right-handed 310
Helix 66	AH3	C	231	240	Right-handed alpha
Helix 67	AH4	C	250	262	Right-handed alpha
Helix 68	AH5	C	269	279	Right-handed alpha
Helix 69	AH6	C	280	285	Right-handed 310
Helix 70	AH7	C	300	309	Right-handed alpha
Helix 71	AH8	C	340	349	Right-handed alpha
Helix 72	AH9	C	395	402	Right-handed alpha
Helix 73	AI1	C	403	406	Right-handed 310
Helix 74	AI2	C	439	449	Right-handed alpha
Helix 75	AI3	C	483	493	Right-handed alpha
Helix 76	AI4	C	524	532	Right-handed alpha
Helix 77	AI5	D	14	21	Right-handed alpha
Helix 78	AI6	D	41	58	Right-handed alpha
Helix 79	AI7	D	73	86	Right-handed alpha
Helix 80	AI8	D	98	110	Right-handed alpha
Helix 81	AI9	D	120	126	Right-handed alpha
Helix 82	AJ1	D	146	154	Right-handed alpha
Helix 83	AJ2	D	189	205	Right-handed alpha
Helix 84	AJ3	D	228	230	Right-handed 310
Helix 85	AJ4	D	231	240	Right-handed alpha
Helix 86	AJ5	D	250	262	Right-handed alpha
Helix 87	AJ6	D	269	279	Right-handed alpha
Helix 88	AJ7	D	280	285	Right-handed 310
Helix 89	AJ8	D	300	309	Right-handed alpha
Helix 90	AJ9	D	340	349	Right-handed alpha
Helix 91	AK1	D	395	402	Right-handed alpha
Helix 92	AK2	D	403	406	Right-handed 310
Helix 93	AK3	D	439	449	Right-handed alpha
Helix 94	AK4	D	483	493	Right-handed alpha
Helix 95	AK5	D	524	532	Right-handed alpha
Helix 96	AK6	E	14	21	Right-handed alpha
Helix 97	AK7	E	41	58	Right-handed alpha
Helix 98	AK8	E	73	86	Right-handed alpha
Helix 99	AK9	E	98	110	Right-handed alpha
Helix 100	AL1	E	120	126	Right-handed alpha
Helix 101	AL2	E	146	154	Right-handed alpha
Helix 102	AL3	E	189	205	Right-handed alpha
Helix 103	AL4	E	228	230	Right-handed 310
Helix 104	AL5	E	231	240	Right-handed alpha
Helix 105	AL6	E	250	262	Right-handed alpha
Helix 106	AL7	E	269	279	Right-handed alpha
Helix 107	AL8	E	280	285	Right-handed 310
Helix 108	AL9	E	300	309	Right-handed alpha
Helix 109	AM1	E	340	349	Right-handed alpha
Helix 110	AM2	E	395	402	Right-handed alpha
Helix 111	AM3	E	403	406	Right-handed 310
Helix 112	AM4	E	439	449	Right-handed alpha
Helix 113	AM5	E	483	493	Right-handed alpha
Helix 114	AM6	E	524	532	Right-handed alpha

There are 30 sheets in PDB entry 8HZX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	37	40	first strand
Strand 2	F	30	33	anti-parallel
Strand 3	F	242	245	parallel
Strand 4	F	217	220	parallel
Strand 5	F	265	268	parallel
Strand 6	F	291	294	parallel
Strand 7	F	315	319	parallel
Strand 8	F	326	329	anti-parallel
Strand 9	F	353	354	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	136	140	first strand
Strand 2	F	113	117	parallel
Strand 3	F	65	69	parallel
Strand 4	F	89	92	parallel
Strand 5	F	169	175	parallel
Strand 6	F	183	188	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	361	363	first strand
Strand 2	F	378	382	anti-parallel
Strand 3	F	407	415	anti-parallel
Strand 4	F	421	426	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	431	433	first strand
Strand 2	F	436	438	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	453	463	first strand
Strand 2	F	467	476	anti-parallel
Strand 3	F	509	511	parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	40	first strand
Strand 2	A	30	33	anti-parallel
Strand 3	A	242	245	parallel
Strand 4	A	217	220	parallel
Strand 5	A	265	268	parallel
Strand 6	A	291	294	parallel
Strand 7	A	315	319	parallel
Strand 8	A	326	329	anti-parallel
Strand 9	A	353	354	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	140	first strand
Strand 2	A	113	117	parallel
Strand 3	A	65	69	parallel
Strand 4	A	89	92	parallel
Strand 5	A	169	175	parallel
Strand 6	A	183	188	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	363	first strand
Strand 2	A	378	382	anti-parallel
Strand 3	A	407	415	anti-parallel
Strand 4	A	421	426	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	431	433	first strand
Strand 2	A	436	438	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	453	463	first strand
Strand 2	A	467	476	anti-parallel
Strand 3	A	509	511	parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	40	first strand
Strand 2	B	30	33	anti-parallel
Strand 3	B	242	245	parallel
Strand 4	B	217	220	parallel
Strand 5	B	265	268	parallel
Strand 6	B	291	294	parallel
Strand 7	B	315	319	parallel
Strand 8	B	326	329	anti-parallel
Strand 9	B	353	354	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	140	first strand
Strand 2	B	113	117	parallel
Strand 3	B	65	69	parallel
Strand 4	B	89	92	parallel
Strand 5	B	169	175	parallel
Strand 6	B	183	188	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	363	first strand
Strand 2	B	378	382	anti-parallel
Strand 3	B	407	415	anti-parallel
Strand 4	B	421	426	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	431	433	first strand
Strand 2	B	436	438	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	453	463	first strand
Strand 2	B	467	476	anti-parallel
Strand 3	B	509	511	parallel

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There are 9 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	40	first strand
Strand 2	C	30	33	anti-parallel
Strand 3	C	242	245	parallel
Strand 4	C	217	220	parallel
Strand 5	C	265	268	parallel
Strand 6	C	291	294	parallel
Strand 7	C	315	319	parallel
Strand 8	C	326	329	anti-parallel
Strand 9	C	353	354	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	140	first strand
Strand 2	C	113	117	parallel
Strand 3	C	65	69	parallel
Strand 4	C	89	92	parallel
Strand 5	C	169	175	parallel
Strand 6	C	183	188	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	363	first strand
Strand 2	C	378	382	anti-parallel
Strand 3	C	407	415	anti-parallel
Strand 4	C	421	426	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	431	433	first strand
Strand 2	C	436	438	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	453	463	first strand
Strand 2	C	467	476	anti-parallel
Strand 3	C	509	511	parallel

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There are 9 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	40	first strand
Strand 2	D	30	33	anti-parallel
Strand 3	D	242	245	parallel
Strand 4	D	217	220	parallel
Strand 5	D	265	268	parallel
Strand 6	D	291	294	parallel
Strand 7	D	315	319	parallel
Strand 8	D	326	329	anti-parallel
Strand 9	D	353	354	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	136	140	first strand
Strand 2	D	113	117	parallel
Strand 3	D	65	69	parallel
Strand 4	D	89	92	parallel
Strand 5	D	169	175	parallel
Strand 6	D	183	188	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	361	363	first strand
Strand 2	D	378	382	anti-parallel
Strand 3	D	407	415	anti-parallel
Strand 4	D	421	426	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	431	433	first strand
Strand 2	D	436	438	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	453	463	first strand
Strand 2	D	467	476	anti-parallel
Strand 3	D	509	511	parallel

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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	37	40	first strand
Strand 2	E	30	33	anti-parallel
Strand 3	E	242	245	parallel
Strand 4	E	217	220	parallel
Strand 5	E	265	268	parallel
Strand 6	E	291	294	parallel
Strand 7	E	315	319	parallel
Strand 8	E	326	329	anti-parallel
Strand 9	E	353	354	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	140	first strand
Strand 2	E	113	117	parallel
Strand 3	E	65	69	parallel
Strand 4	E	89	92	parallel
Strand 5	E	169	175	parallel
Strand 6	E	183	188	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	361	363	first strand
Strand 2	E	378	382	anti-parallel
Strand 3	E	407	415	anti-parallel
Strand 4	E	421	426	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	431	433	first strand
Strand 2	E	436	438	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	453	463	first strand
Strand 2	E	467	476	anti-parallel
Strand 3	E	509	511	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8HZX

Analysis of interatomic Contacts of Structural Units in PDB entry:
8HZX