Analysis of interatomic Contacts of Structural Units in PDB entry:
8HZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8HZY entry

There are 2 chains in PDB entry 8HZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 10ARG 485
B
 ALA 10ARG 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 8HZY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 15Right-handed 310
Helix 2
AA2
A
21 36Right-handed alpha
Helix 3
AA3
A
40 59Right-handed alpha
Helix 4
AA4
A
65 74Right-handed alpha
Helix 5
AA5
A
76 88Right-handed alpha
Helix 6
AA6
A
90 99Right-handed alpha
Helix 7
AA7
A
102 109Right-handed alpha
Helix 8
AA8
A
109 116Right-handed alpha
Helix 9
AA9
A
117 124Right-handed alpha
Helix 10
AB1
A
157 159Right-handed 310
Helix 11
AB2
A
160 173Right-handed alpha
Helix 12
AB3
A
190 194Right-handed 310
Helix 13
AB4
A
196 207Right-handed alpha
Helix 14
AB5
A
221 228Right-handed alpha
Helix 15
AB6
A
229 234Right-handed 310
Helix 16
AB7
A
245 254Right-handed alpha
Helix 17
AB8
A
257 277Right-handed alpha
Helix 18
AB9
A
294 310Right-handed alpha
Helix 19
AC1
A
339 355Right-handed alpha
Helix 20
AC2
A
363 370Right-handed alpha
Helix 21
AC3
A
381 385Right-handed 310
Helix 22
AC4
A
416 419Right-handed 310
Helix 23
AC5
A
430 441Right-handed alpha
Helix 24
AC6
A
450 455Right-handed 310
Helix 25
AC7
A
456 475Right-handed alpha
Helix 26
AC8
B
10 14Right-handed 310
Helix 27
AC9
B
21 35Right-handed alpha
Helix 28
AD1
B
40 61Right-handed alpha
Helix 29
AD2
B
65 74Right-handed alpha
Helix 30
AD3
B
76 88Right-handed alpha
Helix 31
AD4
B
90 99Right-handed alpha
Helix 32
AD5
B
102 109Right-handed alpha
Helix 33
AD6
B
109 116Right-handed alpha
Helix 34
AD7
B
117 124Right-handed alpha
Helix 35
AD8
B
148 153Right-handed 310
Helix 36
AD9
B
157 159Right-handed 310
Helix 37
AE1
B
160 175Right-handed alpha
Helix 38
AE2
B
190 194Right-handed 310
Helix 39
AE3
B
196 207Right-handed alpha
Helix 40
AE4
B
221 228Right-handed alpha
Helix 41
AE5
B
229 234Right-handed 310
Helix 42
AE6
B
245 254Right-handed alpha
Helix 43
AE7
B
257 277Right-handed alpha
Helix 44
AE8
B
292 294Right-handed 310
Helix 45
AE9
B
295 310Right-handed alpha
Helix 46
AF1
B
338 355Right-handed alpha
Helix 47
AF2
B
363 371Right-handed alpha
Helix 48
AF3
B
381 385Right-handed 310
Helix 49
AF4
B
406 410Right-handed 310
Helix 50
AF5
B
416 419Right-handed 310
Helix 51
AF6
B
430 441Right-handed alpha
Helix 52
AF7
B
450 455Right-handed 310
Helix 53
AF8
B
456 475Right-handed alpha
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There are 4 sheets in PDB entry 8HZY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 185first strand
Strand 2
A
132 136parallel
Strand 3
A
394 398parallel
Strand 4
A
402 404anti-parallel
Strand 5
A
421 424anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 215first strand
Strand 2
A
236 241parallel
Strand 3
A
281 288parallel
Strand 4
A
317 322parallel
Strand 5
A
359 362parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 185first strand
Strand 2
B
132 135parallel
Strand 3
B
394 397parallel
Strand 4
B
402 404anti-parallel
Strand 5
B
421 424anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 215first strand
Strand 2
B
236 241parallel
Strand 3
B
281 287parallel
Strand 4
B
317 321parallel
Strand 5
B
359 362parallel
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