Analysis of interatomic Contacts of Structural Units in PDB entry:
8I02

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I02 entry

There are 7 chains in PDB entry 8I02 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	ILE 114	THR 404
A	ASP 38	VAL 1053
B	LYS 6	PRO 374
C	ASN 21	ASN 419
D	HIS 170	VAL 337
E	LYS 169	PRO 329
G	ASN 262	SER 606

There are 89 helices in PDB entry 8I02. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	149	153	Right-handed 310
Helix 2	AA2	F	160	165	Right-handed alpha
Helix 3	AA3	F	178	188	Right-handed alpha
Helix 4	AA4	F	196	201	Right-handed alpha
Helix 5	AA5	F	268	272	Right-handed 310
Helix 6	AA6	F	343	371	Right-handed alpha
Helix 7	AA7	F	390	403	Right-handed alpha
Helix 8	AA8	A	40	50	Right-handed alpha
Helix 9	AA9	A	53	69	Right-handed alpha
Helix 10	AB1	A	73	85	Right-handed alpha
Helix 11	AB2	A	88	96	Right-handed alpha
Helix 12	AB3	A	137	156	Right-handed alpha
Helix 13	AB4	A	163	176	Right-handed alpha
Helix 14	AB5	A	179	191	Right-handed alpha
Helix 15	AB6	A	200	204	Right-handed 310
Helix 16	AB7	A	236	241	Right-handed alpha
Helix 17	AB8	A	257	268	Right-handed alpha
Helix 18	AB9	A	270	286	Right-handed alpha
Helix 19	AC1	A	290	298	Right-handed alpha
Helix 20	AC2	A	307	316	Right-handed alpha
Helix 21	AC3	A	319	328	Right-handed alpha
Helix 22	AC4	A	347	351	Right-handed 310
Helix 23	AC5	A	392	425	Right-handed alpha
Helix 24	AC6	A	431	435	Right-handed 310
Helix 25	AC7	A	445	457	Right-handed alpha
Helix 26	AC8	A	458	460	Right-handed 310
Helix 27	AC9	A	461	472	Right-handed alpha
Helix 28	AD1	A	475	497	Right-handed alpha
Helix 29	AD2	A	498	510	Right-handed alpha
Helix 30	AD3	A	511	514	Right-handed 310
Helix 31	AD4	A	516	529	Right-handed alpha
Helix 32	AD5	A	530	549	Right-handed alpha
Helix 33	AD6	A	565	584	Right-handed alpha
Helix 34	AD7	A	590	604	Right-handed alpha
Helix 35	AD8	A	609	614	Right-handed alpha
Helix 36	AD9	A	614	619	Right-handed alpha
Helix 37	AE1	A	746	770	Right-handed alpha
Helix 38	AE2	A	783	788	Right-handed 310
Helix 39	AE3	A	807	822	Right-handed alpha
Helix 40	AE4	A	825	838	Right-handed alpha
Helix 41	AE5	A	846	859	Right-handed alpha
Helix 42	AE6	A	866	877	Right-handed alpha
Helix 43	AE7	A	887	896	Right-handed alpha
Helix 44	AE8	A	976	989	Right-handed alpha
Helix 45	AE9	A	1022	1026	Right-handed 310
Helix 46	AF1	A	1029	1051	Right-handed alpha
Helix 47	AF2	B	13	19	Right-handed 310
Helix 48	AF3	B	30	42	Right-handed alpha
Helix 49	AF4	B	66	74	Right-handed alpha
Helix 50	AF5	B	86	91	Right-handed alpha
Helix 51	AF6	B	102	123	Right-handed alpha
Helix 52	AF7	B	152	161	Right-handed alpha
Helix 53	AF8	B	177	183	Right-handed alpha
Helix 54	AF9	B	230	249	Right-handed alpha
Helix 55	AG1	B	274	286	Right-handed alpha
Helix 56	AG2	B	287	289	Right-handed 310
Helix 57	AG3	B	301	317	Right-handed alpha
Helix 58	AG4	B	330	335	Right-handed 310
Helix 59	AG5	B	352	369	Right-handed alpha
Helix 60	AG6	C	22	40	Right-handed alpha
Helix 61	AG7	C	159	165	Right-handed alpha
Helix 62	AG8	C	355	358	Right-handed 310
Helix 63	AG9	C	413	418	Right-handed alpha
Helix 64	AH1	D	175	191	Right-handed alpha
Helix 65	AH2	D	205	216	Right-handed alpha
Helix 66	AH3	D	217	219	Right-handed 310
Helix 67	AH4	D	221	240	Right-handed alpha
Helix 68	AH5	D	249	251	Right-handed 310
Helix 69	AH6	D	252	263	Right-handed alpha
Helix 70	AH7	D	267	271	Right-handed 310
Helix 71	AH8	D	277	283	Right-handed alpha
Helix 72	AH9	D	296	314	Right-handed alpha
Helix 73	AI1	D	328	335	Right-handed alpha
Helix 74	AI2	E	177	178	Right-handed 310
Helix 75	AI3	E	180	180	Right-handed 310
Helix 76	AI4	E	181	191	Right-handed alpha
Helix 77	AI5	E	204	216	Right-handed alpha
Helix 78	AI6	E	221	244	Right-handed alpha
Helix 79	AI7	E	253	263	Right-handed alpha
Helix 80	AI8	E	267	271	Right-handed 310
Helix 81	AI9	E	276	284	Right-handed alpha
Helix 82	AJ1	E	284	289	Right-handed alpha
Helix 83	AJ2	E	294	315	Right-handed alpha
Helix 84	AJ3	G	334	345	Right-handed alpha
Helix 85	AJ4	G	356	361	Right-handed alpha
Helix 86	AJ5	G	518	545	Right-handed alpha
Helix 87	AJ6	G	547	568	Right-handed alpha
Helix 88	AJ7	G	575	587	Right-handed alpha
Helix 89	AJ8	G	600	605	Right-handed 310

There are 20 sheets in PDB entry 8I02. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	254	256	first strand
Strand 2	F	284	286	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	472	474	first strand
Strand 2	F	339	342	parallel
Strand 3	G	487	489	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	117	first strand
Strand 2	A	122	124	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	224	225	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	343	first strand
Strand 2	A	368	369	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	743	745	first strand
Strand 2	A	904	911	anti-parallel
Strand 3	A	916	918	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	743	745	first strand
Strand 2	A	904	911	anti-parallel
Strand 3	A	921	924	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	992	995	first strand
Strand 2	A	1015	1019	anti-parallel
Strand 3	C	41	47	anti-parallel
Strand 4	C	407	412	anti-parallel
Strand 5	C	398	401	anti-parallel
Strand 6	C	387	390	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	51	first strand
Strand 2	B	9	11	parallel
Strand 3	B	128	131	parallel
Strand 4	B	292	295	parallel
Strand 5	B	254	257	parallel
Strand 6	B	167	171	parallel
Strand 7	B	190	197	parallel
Strand 8	B	220	225	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	213	first strand
Strand 2	B	216	217	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	82	first strand
Strand 2	C	85	96	anti-parallel
Strand 3	C	120	125	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	148	first strand
Strand 2	C	155	158	anti-parallel
Strand 3	C	178	180	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	187	192	first strand
Strand 2	C	200	204	anti-parallel
Strand 3	C	209	212	anti-parallel
Strand 4	C	226	230	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	239	241	first strand
Strand 2	C	251	253	anti-parallel
Strand 3	C	259	261	anti-parallel
Strand 4	C	275	277	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	287	first strand
Strand 2	C	296	301	anti-parallel
Strand 3	C	307	310	anti-parallel
Strand 4	C	319	320	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	333	first strand
Strand 2	C	341	345	anti-parallel
Strand 3	C	350	353	anti-parallel
Strand 4	C	374	378	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	194	195	first strand
Strand 2	D	325	326	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	276	277	first strand
Strand 2	G	284	285	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	367	368	first strand
Strand 2	G	374	375	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	423	424	first strand
Strand 2	G	431	432	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I02

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I02