Analysis of interatomic Contacts of Structural Units in PDB entry:
8I03

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I03 entry

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 15 chains in PDB entry 8I03 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 503	PRO 1219
B	THR 399	THR 1146
C	GLY 2	SER 371
D	LYS 7	ASN 369
E	ALA 311	GLY 484
F	MET 1	ASP 18
F	ASP 20	ALA 21
F	ASP 23	ASP 23
F	ASP 25	SER 26
F	ILE 28	VAL 228
G	MET 1	LYS 266
H	GLY 5	MET 130
I	GLN 166	LYS 350
J	GLN 14	GLY 418
K	GLN 14	GLY 418

There are132 helices in PDB entry 8I03. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	511	522	Right-handed alpha
Helix 2	AA2	A	531	543	Right-handed alpha
Helix 3	AA3	A	547	559	Right-handed alpha
Helix 4	AA4	A	562	573	Right-handed alpha
Helix 5	AA5	A	589	593	Right-handed 310
Helix 6	AA6	A	604	610	Right-handed 310
Helix 7	AA7	A	618	623	Right-handed alpha
Helix 8	AA8	A	647	684	Right-handed alpha
Helix 9	AA9	A	689	693	Right-handed 310
Helix 10	AB1	A	704	717	Right-handed alpha
Helix 11	AB2	A	720	731	Right-handed alpha
Helix 12	AB3	A	731	770	Right-handed alpha
Helix 13	AB4	A	771	773	Right-handed 310
Helix 14	AB5	A	782	787	Right-handed alpha
Helix 15	AB6	A	789	810	Right-handed alpha
Helix 16	AB7	A	827	842	Right-handed alpha
Helix 17	AB8	A	847	866	Right-handed alpha
Helix 18	AB9	A	869	874	Right-handed 310
Helix 19	AC1	A	1007	1039	Right-handed alpha
Helix 20	AC2	A	1044	1050	Right-handed alpha
Helix 21	AC3	A	1069	1084	Right-handed alpha
Helix 22	AC4	A	1087	1100	Right-handed alpha
Helix 23	AC5	A	1103	1107	Right-handed 310
Helix 24	AC6	A	1108	1124	Right-handed alpha
Helix 25	AC7	A	1126	1142	Right-handed alpha
Helix 26	AC8	A	1146	1162	Right-handed alpha
Helix 27	AC9	A	1196	1207	Right-handed alpha
Helix 28	AD1	B	408	422	Right-handed alpha
Helix 29	AD2	B	424	440	Right-handed alpha
Helix 30	AD3	B	444	457	Right-handed alpha
Helix 31	AD4	B	458	469	Right-handed alpha
Helix 32	AD5	B	484	493	Right-handed 310
Helix 33	AD6	B	504	508	Right-handed 310
Helix 34	AD7	B	518	523	Right-handed alpha
Helix 35	AD8	B	547	578	Right-handed alpha
Helix 36	AD9	B	579	585	Right-handed 310
Helix 37	AE1	B	586	596	Right-handed alpha
Helix 38	AE2	B	597	609	Right-handed alpha
Helix 39	AE3	B	612	624	Right-handed alpha
Helix 40	AE4	B	624	664	Right-handed alpha
Helix 41	AE5	B	669	681	Right-handed alpha
Helix 42	AE6	B	682	699	Right-handed alpha
Helix 43	AE7	B	717	732	Right-handed alpha
Helix 44	AE8	B	738	758	Right-handed alpha
Helix 45	AE9	B	837	842	Right-handed alpha
Helix 46	AF1	B	849	876	Right-handed alpha
Helix 47	AF2	B	884	898	Right-handed alpha
Helix 48	AF3	B	902	911	Right-handed alpha
Helix 49	AF4	B	912	914	Right-handed 310
Helix 50	AF5	B	915	920	Right-handed alpha
Helix 51	AF6	B	923	941	Right-handed alpha
Helix 52	AF7	B	943	954	Right-handed alpha
Helix 53	AF8	B	961	976	Right-handed alpha
Helix 54	AF9	B	1011	1026	Right-handed alpha
Helix 55	AG1	B	1107	1125	Right-handed alpha
Helix 56	AG2	B	1136	1145	Right-handed alpha
Helix 57	AG3	C	15	19	Right-handed 310
Helix 58	AG4	C	29	42	Right-handed alpha
Helix 59	AG5	C	43	46	Right-handed 310
Helix 60	AG6	C	57	62	Right-handed alpha
Helix 61	AG7	C	66	76	Right-handed alpha
Helix 62	AG8	C	80	83	Right-handed 310
Helix 63	AG9	C	84	92	Right-handed alpha
Helix 64	AH1	C	102	124	Right-handed alpha
Helix 65	AH2	C	151	161	Right-handed alpha
Helix 66	AH3	C	177	184	Right-handed alpha
Helix 67	AH4	C	213	217	Right-handed 310
Helix 68	AH5	C	230	249	Right-handed alpha
Helix 69	AH6	C	274	287	Right-handed alpha
Helix 70	AH7	C	301	317	Right-handed alpha
Helix 71	AH8	C	330	334	Right-handed 310
Helix 72	AH9	C	352	369	Right-handed alpha
Helix 73	AI1	D	13	19	Right-handed 310
Helix 74	AI2	D	29	42	Right-handed alpha
Helix 75	AI3	D	57	62	Right-handed alpha
Helix 76	AI4	D	66	76	Right-handed alpha
Helix 77	AI5	D	88	92	Right-handed 310
Helix 78	AI6	D	102	123	Right-handed alpha
Helix 79	AI7	D	151	161	Right-handed alpha
Helix 80	AI8	D	177	184	Right-handed alpha
Helix 81	AI9	D	213	217	Right-handed 310
Helix 82	AJ1	D	230	249	Right-handed alpha
Helix 83	AJ2	D	274	287	Right-handed alpha
Helix 84	AJ3	D	301	318	Right-handed alpha
Helix 85	AJ4	D	330	335	Right-handed 310
Helix 86	AJ5	D	352	367	Right-handed alpha
Helix 87	AJ6	E	312	343	Right-handed alpha
Helix 88	AJ7	E	347	423	Right-handed alpha
Helix 89	AJ8	E	435	460	Right-handed alpha
Helix 90	AJ9	E	472	484	Right-handed alpha
Helix 91	AK1	F	2	17	Right-handed alpha
Helix 92	AK2	F	42	46	Right-handed 310
Helix 93	AK3	F	86	90	Right-handed 310
Helix 94	AK4	F	96	101	Right-handed alpha
Helix 95	AK5	F	106	112	Right-handed 310
Helix 96	AK6	F	113	120	Right-handed alpha
Helix 97	AK7	F	124	155	Right-handed alpha
Helix 98	AK8	F	163	168	Right-handed alpha
Helix 99	AK9	F	173	217	Right-handed alpha
Helix 100	AL1	G	2	6	Right-handed 310
Helix 101	AL2	G	24	43	Right-handed alpha
Helix 102	AL3	G	49	138	Right-handed alpha
Helix 103	AL4	G	232	242	Right-handed alpha
Helix 104	AL5	G	248	265	Right-handed alpha
Helix 105	AL6	H	9	22	Right-handed alpha
Helix 106	AL7	H	22	39	Right-handed alpha
Helix 107	AL8	H	40	57	Right-handed alpha
Helix 108	AL9	H	64	112	Right-handed alpha
Helix 109	AM1	H	116	120	Right-handed 310
Helix 110	AM2	I	182	187	Right-handed alpha
Helix 111	AM3	I	212	216	Right-handed 310
Helix 112	AM4	I	226	230	Right-handed 310
Helix 113	AM5	I	235	240	Right-handed alpha
Helix 114	AM6	I	253	261	Right-handed alpha
Helix 115	AM7	I	323	328	Right-handed alpha
Helix 116	AM8	I	332	344	Right-handed alpha
Helix 117	AM9	J	15	36	Right-handed alpha
Helix 118	AN1	J	37	39	Right-handed 310
Helix 119	AN2	J	159	166	Right-handed alpha
Helix 120	AN3	J	215	217	Right-handed 310
Helix 121	AN4	J	267	271	Right-handed 310
Helix 122	AN5	J	356	358	Right-handed 310
Helix 123	AN6	J	364	368	Right-handed 310
Helix 124	AN7	J	413	418	Right-handed alpha
Helix 125	AN8	K	15	36	Right-handed alpha
Helix 126	AN9	K	37	39	Right-handed 310
Helix 127	AO1	K	159	166	Right-handed alpha
Helix 128	AO2	K	215	217	Right-handed 310
Helix 129	AO3	K	267	271	Right-handed 310
Helix 130	AO4	K	356	358	Right-handed 310
Helix 131	AO5	K	364	368	Right-handed 310
Helix 132	AO6	K	413	418	Right-handed alpha

There are 25 sheets in PDB entry 8I03. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	600	602	first strand
Strand 2	A	627	629	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	819	822	first strand
Strand 2	A	1178	1184	anti-parallel
Strand 3	A	1167	1173	anti-parallel
Strand 4	A	1001	1006	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	476	479	first strand
Strand 2	I	175	178	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	501	first strand
Strand 2	B	528	529	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	710	713	first strand
Strand 2	B	993	999	anti-parallel
Strand 3	B	982	988	anti-parallel
Strand 4	B	844	848	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1078	1080	first strand
Strand 2	B	1087	1089	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1098	first strand
Strand 2	J	41	48	anti-parallel
Strand 3	J	406	412	anti-parallel
Strand 4	J	398	402	anti-parallel
Strand 5	J	385	390	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	51	first strand
Strand 2	C	8	11	parallel
Strand 3	C	128	131	parallel
Strand 4	C	292	295	parallel
Strand 5	C	253	257	parallel
Strand 6	C	167	171	parallel
Strand 7	C	190	197	parallel
Strand 8	C	220	225	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	51	first strand
Strand 2	D	8	11	parallel
Strand 3	D	128	131	parallel
Strand 4	D	292	295	parallel
Strand 5	D	253	257	parallel
Strand 6	D	167	171	parallel
Strand 7	D	190	197	parallel
Strand 8	D	220	225	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	66	first strand
Strand 2	F	69	71	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	200	202	first strand
Strand 2	I	219	224	parallel
Strand 3	I	274	281	anti-parallel
Strand 4	I	308	316	anti-parallel
Strand 5	I	248	249	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	291	292	first strand
Strand 2	I	295	296	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	53	65	first strand
Strand 2	J	70	80	anti-parallel
Strand 3	J	86	96	anti-parallel
Strand 4	J	120	127	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	134	137	first strand
Strand 2	J	145	148	anti-parallel
Strand 3	J	155	158	anti-parallel
Strand 4	J	178	180	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	187	192	first strand
Strand 2	J	199	204	anti-parallel
Strand 3	J	209	213	anti-parallel
Strand 4	J	226	230	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	237	242	first strand
Strand 2	J	250	254	anti-parallel
Strand 3	J	258	262	anti-parallel
Strand 4	J	275	278	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	284	289	first strand
Strand 2	J	296	301	anti-parallel
Strand 3	J	306	310	anti-parallel
Strand 4	J	320	321	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	328	333	first strand
Strand 2	J	340	345	anti-parallel
Strand 3	J	350	354	anti-parallel
Strand 4	J	374	378	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	41	48	first strand
Strand 2	K	406	412	anti-parallel
Strand 3	K	398	402	anti-parallel
Strand 4	K	385	390	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	53	65	first strand
Strand 2	K	70	80	anti-parallel
Strand 3	K	86	96	anti-parallel
Strand 4	K	120	127	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	134	137	first strand
Strand 2	K	145	148	anti-parallel
Strand 3	K	155	158	anti-parallel
Strand 4	K	178	180	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	187	192	first strand
Strand 2	K	199	204	anti-parallel
Strand 3	K	209	213	anti-parallel
Strand 4	K	226	230	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	237	242	first strand
Strand 2	K	250	254	anti-parallel
Strand 3	K	258	262	anti-parallel
Strand 4	K	275	278	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	284	289	first strand
Strand 2	K	296	301	anti-parallel
Strand 3	K	306	310	anti-parallel
Strand 4	K	320	321	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	328	333	first strand
Strand 2	K	340	345	anti-parallel
Strand 3	K	350	354	anti-parallel
Strand 4	K	374	378	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I03

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I03