Analysis of interatomic Contacts of Structural Units in PDB entry:
8I07

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I07 entry

There are 3 chains in PDB entry 8I07 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 0	GLU 593
B	GLY 0	GLU 593
C	GLY 0	PRO 125

There are199 helices in PDB entry 8I07. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	17	Right-handed alpha
Helix 2	AA2	A	27	29	Right-handed 310
Helix 3	AA3	A	30	41	Right-handed alpha
Helix 4	AA4	A	50	65	Right-handed alpha
Helix 5	AA5	A	77	82	Right-handed alpha
Helix 6	AA6	A	83	94	Right-handed alpha
Helix 7	AA7	A	105	109	Right-handed 310
Helix 8	AA8	A	118	124	Right-handed alpha
Helix 9	AA9	A	125	127	Right-handed 310
Helix 10	AB1	A	135	137	Right-handed 310
Helix 11	AB2	A	138	152	Right-handed alpha
Helix 12	AB3	A	164	169	Right-handed alpha
Helix 13	AB4	A	174	178	Right-handed 310
Helix 14	AB5	A	189	203	Right-handed alpha
Helix 15	AB6	A	211	217	Right-handed alpha
Helix 16	AB7	A	219	231	Right-handed alpha
Helix 17	AB8	A	261	271	Right-handed alpha
Helix 18	AB9	A	282	287	Right-handed alpha
Helix 19	AC1	A	288	293	Right-handed alpha
Helix 20	AC2	A	304	308	Right-handed 310
Helix 21	AC3	A	321	339	Right-handed alpha
Helix 22	AC4	A	345	359	Right-handed alpha
Helix 23	AC5	A	371	383	Right-handed alpha
Helix 24	AC6	A	394	404	Right-handed alpha
Helix 25	AC7	A	423	435	Right-handed alpha
Helix 26	AC8	A	446	452	Right-handed alpha
Helix 27	AC9	A	455	463	Right-handed alpha
Helix 28	AD1	A	476	484	Right-handed alpha
Helix 29	AD2	A	485	487	Right-handed 310
Helix 30	AD3	A	501	505	Right-handed 310
Helix 31	AD4	A	510	518	Right-handed alpha
Helix 32	AD5	A	527	529	Right-handed 310
Helix 33	AD6	A	530	546	Right-handed alpha
Helix 34	AD7	B	6	17	Right-handed alpha
Helix 35	AD8	B	27	29	Right-handed 310
Helix 36	AD9	B	30	41	Right-handed alpha
Helix 37	AE1	B	50	65	Right-handed alpha
Helix 38	AE2	B	77	82	Right-handed alpha
Helix 39	AE3	B	83	93	Right-handed alpha
Helix 40	AE4	B	105	109	Right-handed 310
Helix 41	AE5	B	118	124	Right-handed alpha
Helix 42	AE6	B	125	127	Right-handed 310
Helix 43	AE7	B	135	137	Right-handed 310
Helix 44	AE8	B	138	152	Right-handed alpha
Helix 45	AE9	B	164	169	Right-handed alpha
Helix 46	AF1	B	174	178	Right-handed 310
Helix 47	AF2	B	189	203	Right-handed alpha
Helix 48	AF3	B	211	217	Right-handed alpha
Helix 49	AF4	B	219	231	Right-handed alpha
Helix 50	AF5	B	261	271	Right-handed alpha
Helix 51	AF6	B	282	287	Right-handed alpha
Helix 52	AF7	B	288	294	Right-handed alpha
Helix 53	AF8	B	304	308	Right-handed 310
Helix 54	AF9	B	321	339	Right-handed alpha
Helix 55	AG1	B	345	359	Right-handed alpha
Helix 56	AG2	B	371	383	Right-handed alpha
Helix 57	AG3	B	394	404	Right-handed alpha
Helix 58	AG4	B	423	435	Right-handed alpha
Helix 59	AG5	B	446	452	Right-handed alpha
Helix 60	AG6	B	455	463	Right-handed alpha
Helix 61	AG7	B	476	484	Right-handed alpha
Helix 62	AG8	B	485	487	Right-handed 310
Helix 63	AG9	B	501	505	Right-handed 310
Helix 64	AH1	B	510	518	Right-handed alpha
Helix 65	AH2	B	527	529	Right-handed 310
Helix 66	AH3	B	530	546	Right-handed alpha
Helix 67	AH4	B	566	570	Right-handed 310
Helix 68	AH5	C	6	17	Right-handed alpha
Helix 69	AH6	C	27	29	Right-handed 310
Helix 70	AH7	C	30	41	Right-handed alpha
Helix 71	AH8	C	50	65	Right-handed alpha
Helix 72	AH9	C	77	82	Right-handed alpha
Helix 73	AI1	C	83	93	Right-handed alpha
Helix 74	AI2	C	105	109	Right-handed 310
Helix 75	AI3	C	118	124	Right-handed alpha
Helix 76	AI4	C	125	127	Right-handed 310
Helix 77	AI5	C	137	152	Right-handed alpha
Helix 78	AI6	C	164	169	Right-handed alpha
Helix 79	AI7	C	174	178	Right-handed 310
Helix 80	AI8	C	189	203	Right-handed alpha
Helix 81	AI9	C	211	217	Right-handed alpha
Helix 82	AJ1	C	219	231	Right-handed alpha
Helix 83	AJ2	C	261	271	Right-handed alpha
Helix 84	AJ3	C	282	287	Right-handed alpha
Helix 85	AJ4	C	288	293	Right-handed alpha
Helix 86	AJ5	C	304	308	Right-handed 310
Helix 87	AJ6	C	321	339	Right-handed alpha
Helix 88	AJ7	C	345	359	Right-handed alpha
Helix 89	AJ8	C	371	383	Right-handed alpha
Helix 90	AJ9	C	394	404	Right-handed alpha
Helix 91	AK1	C	423	435	Right-handed alpha
Helix 92	AK2	C	446	452	Right-handed alpha
Helix 93	AK3	C	455	462	Right-handed alpha
Helix 94	AK4	C	476	483	Right-handed alpha
Helix 95	AK5	C	484	487	Right-handed 310
Helix 96	AK6	C	501	505	Right-handed 310
Helix 97	AK7	C	510	518	Right-handed alpha
Helix 98	AK8	C	527	529	Right-handed 310
Helix 99	AK9	C	530	546	Right-handed alpha
Helix 100	AL1	D	6	17	Right-handed alpha
Helix 101	AL2	D	27	29	Right-handed 310
Helix 102	AL3	D	30	41	Right-handed alpha
Helix 103	AL4	D	50	65	Right-handed alpha
Helix 104	AL5	D	77	82	Right-handed alpha
Helix 105	AL6	D	83	93	Right-handed alpha
Helix 106	AL7	D	105	109	Right-handed 310
Helix 107	AL8	D	118	124	Right-handed alpha
Helix 108	AL9	D	125	127	Right-handed 310
Helix 109	AM1	D	135	137	Right-handed 310
Helix 110	AM2	D	138	152	Right-handed alpha
Helix 111	AM3	D	164	169	Right-handed alpha
Helix 112	AM4	D	174	178	Right-handed 310
Helix 113	AM5	D	189	203	Right-handed alpha
Helix 114	AM6	D	211	217	Right-handed alpha
Helix 115	AM7	D	219	231	Right-handed alpha
Helix 116	AM8	D	261	271	Right-handed alpha
Helix 117	AM9	D	282	287	Right-handed alpha
Helix 118	AN1	D	288	294	Right-handed alpha
Helix 119	AN2	D	304	308	Right-handed 310
Helix 120	AN3	D	321	339	Right-handed alpha
Helix 121	AN4	D	345	359	Right-handed alpha
Helix 122	AN5	D	371	383	Right-handed alpha
Helix 123	AN6	D	394	404	Right-handed alpha
Helix 124	AN7	D	423	435	Right-handed alpha
Helix 125	AN8	D	446	452	Right-handed alpha
Helix 126	AN9	D	455	462	Right-handed alpha
Helix 127	AO1	D	476	484	Right-handed alpha
Helix 128	AO2	D	485	487	Right-handed 310
Helix 129	AO3	D	501	505	Right-handed 310
Helix 130	AO4	D	510	518	Right-handed alpha
Helix 131	AO5	D	527	529	Right-handed 310
Helix 132	AO6	D	530	546	Right-handed alpha
Helix 133	AO7	D	566	570	Right-handed 310
Helix 134	AO8	E	6	17	Right-handed alpha
Helix 135	AO9	E	27	29	Right-handed 310
Helix 136	AP1	E	30	41	Right-handed alpha
Helix 137	AP2	E	50	65	Right-handed alpha
Helix 138	AP3	E	77	82	Right-handed alpha
Helix 139	AP4	E	83	93	Right-handed alpha
Helix 140	AP5	E	105	109	Right-handed 310
Helix 141	AP6	E	118	124	Right-handed alpha
Helix 142	AP7	E	125	127	Right-handed 310
Helix 143	AP8	E	135	137	Right-handed 310
Helix 144	AP9	E	138	152	Right-handed alpha
Helix 145	AQ1	E	164	169	Right-handed alpha
Helix 146	AQ2	E	174	178	Right-handed 310
Helix 147	AQ3	E	189	203	Right-handed alpha
Helix 148	AQ4	E	211	217	Right-handed alpha
Helix 149	AQ5	E	219	231	Right-handed alpha
Helix 150	AQ6	E	261	271	Right-handed alpha
Helix 151	AQ7	E	282	287	Right-handed alpha
Helix 152	AQ8	E	288	294	Right-handed alpha
Helix 153	AQ9	E	304	308	Right-handed 310
Helix 154	AR1	E	321	339	Right-handed alpha
Helix 155	AR2	E	345	359	Right-handed alpha
Helix 156	AR3	E	371	383	Right-handed alpha
Helix 157	AR4	E	394	404	Right-handed alpha
Helix 158	AR5	E	423	435	Right-handed alpha
Helix 159	AR6	E	446	452	Right-handed alpha
Helix 160	AR7	E	455	462	Right-handed alpha
Helix 161	AR8	E	476	484	Right-handed alpha
Helix 162	AR9	E	485	487	Right-handed 310
Helix 163	AS1	E	501	505	Right-handed 310
Helix 164	AS2	E	510	518	Right-handed alpha
Helix 165	AS3	E	527	529	Right-handed 310
Helix 166	AS4	E	530	546	Right-handed alpha
Helix 167	AS5	F	6	17	Right-handed alpha
Helix 168	AS6	F	27	29	Right-handed 310
Helix 169	AS7	F	30	41	Right-handed alpha
Helix 170	AS8	F	50	65	Right-handed alpha
Helix 171	AS9	F	77	82	Right-handed alpha
Helix 172	AT1	F	83	93	Right-handed alpha
Helix 173	AT2	F	105	109	Right-handed 310
Helix 174	AT3	F	118	124	Right-handed alpha
Helix 175	AT4	F	125	127	Right-handed 310
Helix 176	AT5	F	135	137	Right-handed 310
Helix 177	AT6	F	138	152	Right-handed alpha
Helix 178	AT7	F	164	169	Right-handed alpha
Helix 179	AT8	F	174	178	Right-handed 310
Helix 180	AT9	F	189	203	Right-handed alpha
Helix 181	AU1	F	211	217	Right-handed alpha
Helix 182	AU2	F	219	231	Right-handed alpha
Helix 183	AU3	F	261	271	Right-handed alpha
Helix 184	AU4	F	282	287	Right-handed alpha
Helix 185	AU5	F	288	294	Right-handed alpha
Helix 186	AU6	F	304	308	Right-handed 310
Helix 187	AU7	F	321	339	Right-handed alpha
Helix 188	AU8	F	345	359	Right-handed alpha
Helix 189	AU9	F	371	383	Right-handed alpha
Helix 190	AV1	F	394	404	Right-handed alpha
Helix 191	AV2	F	423	435	Right-handed alpha
Helix 192	AV3	F	446	452	Right-handed alpha
Helix 193	AV4	F	455	462	Right-handed alpha
Helix 194	AV5	F	476	484	Right-handed alpha
Helix 195	AV6	F	485	487	Right-handed 310
Helix 196	AV7	F	501	505	Right-handed 310
Helix 197	AV8	F	510	518	Right-handed alpha
Helix 198	AV9	F	527	529	Right-handed 310
Helix 199	AW1	F	530	546	Right-handed alpha

There are 31 sheets in PDB entry 8I07. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	5	first strand
Strand 2	A	170	173	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	47	first strand
Strand 2	A	21	24	parallel
Strand 3	A	70	74	parallel
Strand 4	A	97	103	parallel
Strand 5	A	158	163	parallel
Strand 6	A	129	132	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	236	first strand
Strand 2	A	206	210	parallel
Strand 3	A	273	277	parallel
Strand 4	A	297	302	parallel
Strand 5	A	318	319	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	360	361	first strand
Strand 2	A	576	577	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	414	first strand
Strand 2	A	387	391	parallel
Strand 3	A	439	445	parallel
Strand 4	A	467	472	parallel
Strand 5	A	549	554	parallel
Strand 6	A	521	525	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	5	first strand
Strand 2	B	170	173	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	47	first strand
Strand 2	B	21	24	parallel
Strand 3	B	70	74	parallel
Strand 4	B	97	103	parallel
Strand 5	B	158	163	parallel
Strand 6	B	129	132	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	236	first strand
Strand 2	B	206	210	parallel
Strand 3	B	273	277	parallel
Strand 4	B	297	302	parallel
Strand 5	B	318	319	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	360	361	first strand
Strand 2	B	576	577	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	414	first strand
Strand 2	B	387	391	parallel
Strand 3	B	439	445	parallel
Strand 4	B	467	472	parallel
Strand 5	B	549	554	parallel
Strand 6	B	521	525	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	5	first strand
Strand 2	C	170	173	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	47	first strand
Strand 2	C	21	24	parallel
Strand 3	C	70	74	parallel
Strand 4	C	97	103	parallel
Strand 5	C	158	163	parallel
Strand 6	C	129	132	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	234	236	first strand
Strand 2	C	206	210	parallel
Strand 3	C	273	277	parallel
Strand 4	C	297	302	parallel
Strand 5	C	318	319	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	360	361	first strand
Strand 2	C	576	577	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	414	first strand
Strand 2	C	387	391	parallel
Strand 3	C	439	445	parallel
Strand 4	C	467	472	parallel
Strand 5	C	549	554	parallel
Strand 6	C	521	525	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	563	564	first strand
Strand 2	C	570	571	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	5	first strand
Strand 2	D	170	173	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	47	first strand
Strand 2	D	21	24	parallel
Strand 3	D	70	74	parallel
Strand 4	D	97	103	parallel
Strand 5	D	158	163	parallel
Strand 6	D	129	132	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	234	236	first strand
Strand 2	D	206	210	parallel
Strand 3	D	273	277	parallel
Strand 4	D	297	302	parallel
Strand 5	D	316	319	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	360	361	first strand
Strand 2	D	576	577	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	414	first strand
Strand 2	D	387	391	parallel
Strand 3	D	439	445	parallel
Strand 4	D	467	472	parallel
Strand 5	D	549	554	parallel
Strand 6	D	521	525	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	5	first strand
Strand 2	E	170	173	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	47	first strand
Strand 2	E	21	24	parallel
Strand 3	E	70	74	parallel
Strand 4	E	97	103	parallel
Strand 5	E	158	163	parallel
Strand 6	E	129	132	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	234	236	first strand
Strand 2	E	206	210	parallel
Strand 3	E	273	277	parallel
Strand 4	E	297	302	parallel
Strand 5	E	318	319	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	360	361	first strand
Strand 2	E	576	577	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	414	first strand
Strand 2	E	387	391	parallel
Strand 3	E	439	445	parallel
Strand 4	E	467	472	parallel
Strand 5	E	549	554	parallel
Strand 6	E	521	525	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	5	first strand
Strand 2	F	170	173	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	47	first strand
Strand 2	F	21	24	parallel
Strand 3	F	70	74	parallel
Strand 4	F	97	103	parallel
Strand 5	F	158	163	parallel
Strand 6	F	129	132	parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	234	236	first strand
Strand 2	F	206	210	parallel
Strand 3	F	273	277	parallel
Strand 4	F	297	302	parallel
Strand 5	F	316	319	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	360	361	first strand
Strand 2	F	576	577	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	414	first strand
Strand 2	F	387	391	parallel
Strand 3	F	439	445	parallel
Strand 4	F	467	472	parallel
Strand 5	F	549	554	parallel
Strand 6	F	521	525	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I07

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I07