Analysis of interatomic Contacts of Structural Units in PDB entry:
8I0E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I0E entry

There is 1 chain in PDB entry 8I0E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 4ASN 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8I0E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 33Right-handed alpha
Helix 2
AA2
A
43 53Right-handed alpha
Helix 3
AA3
A
80 92Right-handed alpha
Helix 4
AA4
A
93 108Right-handed alpha
Helix 5
AA5
A
122 131Right-handed alpha
Helix 6
AA6
A
141 150Right-handed alpha
Helix 7
AA7
A
150 157Right-handed alpha
Helix 8
AA8
A
170 176Right-handed alpha
Helix 9
AA9
A
183 187Right-handed 310
Helix 10
AB1
A
188 192Right-handed 310
Helix 11
AB2
A
198 211Right-handed alpha
Helix 12
AB3
A
212 214Right-handed 310
Helix 13
AB4
A
222 225Right-handed 310
Helix 14
AB5
A
226 235Right-handed alpha
Helix 15
AB6
A
245 249Right-handed 310
Helix 16
AB7
A
261 268Right-handed alpha
Helix 17
AB8
A
287 302Right-handed alpha
Helix 18
AB9
A
310 316Right-handed alpha
Helix 19
AC1
A
318 325Right-handed alpha
Helix 20
AC2
A
336 343Right-handed alpha
Helix 21
AC3
A
354 364Right-handed alpha
Helix 22
AC4
A
376 387Right-handed alpha
Helix 23
AC5
A
400 413Right-handed alpha
Helix 24
AC6
A
414 436Right-handed alpha
Helix 25
AC7
A
439 453Right-handed alpha
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There are 2 sheets in PDB entry 8I0E. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
36 42parallel
Strand 3
A
6 11parallel
Strand 4
A
113 117parallel
Strand 5
A
134 138parallel
Strand 6
A
216 219parallel
Strand 7
A
240 242parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 332first strand
Strand 2
A
305 308parallel
Strand 3
A
275 279parallel
Strand 4
A
346 351parallel
Strand 5
A
368 370parallel
Strand 6
A
391 393parallel
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