Analysis of interatomic Contacts of Structural Units in PDB entry:
8I16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I16 entry

There is 1 chain in PDB entry 8I16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 10ILE 760
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8I16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 66Right-handed alpha
Helix 2
AA2
A
78 87Right-handed alpha
Helix 3
AA3
A
88 92Right-handed 310
Helix 4
AA4
A
99 112Right-handed alpha
Helix 5
AA5
A
117 122Right-handed 310
Helix 6
AA6
A
126 139Right-handed alpha
Helix 7
AA7
A
142 153Right-handed alpha
Helix 8
AA8
A
156 174Right-handed alpha
Helix 9
AA9
A
174 200Right-handed alpha
Helix 10
AB1
A
204 218Right-handed alpha
Helix 11
AB2
A
229 235Right-handed alpha
Helix 12
AB3
A
249 262Right-handed alpha
Helix 13
AB4
A
266 282Right-handed alpha
Helix 14
AB5
A
283 286Right-handed 310
Helix 15
AB6
A
287 305Right-handed alpha
Helix 16
AB7
A
308 315Right-handed alpha
Helix 17
AB8
A
336 348Right-handed alpha
Helix 18
AB9
A
349 354Right-handed 310
Helix 19
AC1
A
355 367Right-handed alpha
Helix 20
AC2
A
390 392Right-handed 310
Helix 21
AC3
A
430 434Right-handed 310
Helix 22
AC4
A
466 476Right-handed alpha
Helix 23
AC5
A
480 482Right-handed 310
Helix 24
AC6
A
483 499Right-handed alpha
Helix 25
AC7
A
502 507Right-handed alpha
Helix 26
AC8
A
629 647Right-handed alpha
Helix 27
AC9
A
667 695Right-handed alpha
Helix 28
AD1
A
747 758Right-handed alpha
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There are 2 sheets in PDB entry 8I16. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 389first strand
Strand 2
A
438 444anti-parallel
Strand 3
A
447 455anti-parallel
Strand 4
A
21 29anti-parallel
Strand 5
A
416 420anti-parallel
Strand 6
A
402 405anti-parallel
Strand 7
A
394 397anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
528 534first strand
Strand 2
A
520 525anti-parallel
Strand 3
A
508 512anti-parallel
Strand 4
A
651 655parallel
Strand 5
A
698 702parallel
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