Analysis of interatomic Contacts of Structural Units in PDB entry:
8I24

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I24 entry

There are 8 chains in PDB entry 8I24 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ILE 4	LYS 232
A	ILE 4	ASP 229
C	VAL 2	GLU 1165
D	ASN 28	VAL 1186
E	SER 9	ARG 72
F	GLU 13	ILE 245
O	C 19	T 76
P	A 78	G 135

There are111 helices in PDB entry 8I24. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	31	47	Right-handed alpha
Helix 2	AA2	B	74	83	Right-handed alpha
Helix 3	AA3	B	205	221	Right-handed alpha
Helix 4	AA4	B	221	232	Right-handed alpha
Helix 5	AA5	A	16	18	Right-handed 310
Helix 6	AA6	A	31	47	Right-handed alpha
Helix 7	AA7	A	74	83	Right-handed alpha
Helix 8	AA8	A	110	112	Right-handed 310
Helix 9	AA9	A	205	226	Right-handed alpha
Helix 10	AB1	C	28	50	Right-handed alpha
Helix 11	AB2	C	76	83	Right-handed alpha
Helix 12	AB3	C	190	196	Right-handed alpha
Helix 13	AB4	C	202	210	Right-handed alpha
Helix 14	AB5	C	213	223	Right-handed alpha
Helix 15	AB6	C	227	240	Right-handed alpha
Helix 16	AB7	C	246	259	Right-handed alpha
Helix 17	AB8	C	267	278	Right-handed alpha
Helix 18	AB9	C	279	284	Right-handed alpha
Helix 19	AC1	C	308	316	Right-handed alpha
Helix 20	AC2	C	364	373	Right-handed alpha
Helix 21	AC3	C	377	393	Right-handed alpha
Helix 22	AC4	C	398	413	Right-handed alpha
Helix 23	AC5	C	432	456	Right-handed alpha
Helix 24	AC6	C	465	470	Right-handed alpha
Helix 25	AC7	C	472	485	Right-handed alpha
Helix 26	AC8	C	496	505	Right-handed alpha
Helix 27	AC9	C	528	532	Right-handed 310
Helix 28	AD1	C	644	648	Right-handed 310
Helix 29	AD2	C	655	666	Right-handed alpha
Helix 30	AD3	C	684	693	Right-handed alpha
Helix 31	AD4	C	793	798	Right-handed alpha
Helix 32	AD5	C	831	835	Right-handed 310
Helix 33	AD6	C	870	879	Right-handed alpha
Helix 34	AD7	C	974	979	Right-handed alpha
Helix 35	AD8	C	982	998	Right-handed alpha
Helix 36	AD9	C	1010	1021	Right-handed alpha
Helix 37	AE1	C	1057	1061	Right-handed 310
Helix 38	AE2	C	1090	1101	Right-handed alpha
Helix 39	AE3	C	1102	1112	Right-handed alpha
Helix 40	AE4	C	1116	1130	Right-handed alpha
Helix 41	AE5	C	1139	1152	Right-handed alpha
Helix 42	AE6	D	39	46	Right-handed alpha
Helix 43	AE7	D	107	113	Right-handed 310
Helix 44	AE8	D	127	130	Right-handed 310
Helix 45	AE9	D	135	141	Right-handed alpha
Helix 46	AF1	D	144	153	Right-handed alpha
Helix 47	AF2	D	174	186	Right-handed alpha
Helix 48	AF3	D	194	203	Right-handed alpha
Helix 49	AF4	D	206	219	Right-handed alpha
Helix 50	AF5	D	223	241	Right-handed alpha
Helix 51	AF6	D	245	248	Right-handed 310
Helix 52	AF7	D	258	262	Right-handed 310
Helix 53	AF8	D	275	297	Right-handed alpha
Helix 54	AF9	D	300	320	Right-handed alpha
Helix 55	AG1	D	339	343	Right-handed 310
Helix 56	AG2	D	348	353	Right-handed alpha
Helix 57	AG3	D	382	389	Right-handed alpha
Helix 58	AG4	D	389	401	Right-handed alpha
Helix 59	AG5	D	405	415	Right-handed alpha
Helix 60	AG6	D	417	419	Right-handed 310
Helix 61	AG7	D	420	428	Right-handed alpha
Helix 62	AG8	D	442	444	Right-handed 310
Helix 63	AG9	D	462	464	Right-handed 310
Helix 64	AH1	D	465	470	Right-handed alpha
Helix 65	AH2	D	485	495	Right-handed alpha
Helix 66	AH3	D	497	501	Right-handed 310
Helix 67	AH4	D	516	527	Right-handed alpha
Helix 68	AH5	D	541	551	Right-handed alpha
Helix 69	AH6	D	581	587	Right-handed alpha
Helix 70	AH7	D	616	630	Right-handed alpha
Helix 71	AH8	D	633	654	Right-handed alpha
Helix 72	AH9	D	658	662	Right-handed 310
Helix 73	AI1	D	667	685	Right-handed alpha
Helix 74	AI2	D	692	719	Right-handed alpha
Helix 75	AI3	D	723	731	Right-handed alpha
Helix 76	AI4	D	736	745	Right-handed alpha
Helix 77	AI5	D	771	807	Right-handed alpha
Helix 78	AI6	D	838	842	Right-handed 310
Helix 79	AI7	D	868	879	Right-handed alpha
Helix 80	AI8	D	887	891	Right-handed 310
Helix 81	AI9	D	899	903	Right-handed alpha
Helix 82	AJ1	D	917	928	Right-handed alpha
Helix 83	AJ2	D	929	931	Right-handed 310
Helix 84	AJ3	D	951	961	Right-handed alpha
Helix 85	AJ4	D	1028	1036	Right-handed alpha
Helix 86	AJ5	D	1038	1056	Right-handed alpha
Helix 87	AJ6	D	1061	1072	Right-handed alpha
Helix 88	AJ7	D	1094	1107	Right-handed alpha
Helix 89	AJ8	D	1120	1127	Right-handed alpha
Helix 90	AJ9	D	1130	1138	Right-handed alpha
Helix 91	AK1	D	1139	1151	Right-handed alpha
Helix 92	AK2	D	1158	1166	Right-handed alpha
Helix 93	AK3	D	1171	1174	Right-handed 310
Helix 94	AK4	D	1175	1180	Right-handed alpha
Helix 95	AK5	E	15	21	Right-handed alpha
Helix 96	AK6	E	26	44	Right-handed alpha
Helix 97	AK7	E	54	65	Right-handed alpha
Helix 98	AK8	F	15	28	Right-handed alpha
Helix 99	AK9	F	31	53	Right-handed alpha
Helix 100	AL1	F	62	79	Right-handed alpha
Helix 101	AL2	F	86	107	Right-handed alpha
Helix 102	AL3	F	108	110	Right-handed 310
Helix 103	AL4	F	116	118	Right-handed 310
Helix 104	AL5	F	122	129	Right-handed alpha
Helix 105	AL6	F	135	157	Right-handed alpha
Helix 106	AL7	F	160	167	Right-handed alpha
Helix 107	AL8	F	171	189	Right-handed alpha
Helix 108	AL9	F	192	197	Right-handed alpha
Helix 109	AM1	F	203	211	Right-handed alpha
Helix 110	AM2	F	214	232	Right-handed alpha
Helix 111	AM3	F	234	245	Right-handed alpha

There are 44 sheets in PDB entry 8I24. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	14	first strand
Strand 2	B	20	29	anti-parallel
Strand 3	B	191	200	anti-parallel
Strand 4	B	173	181	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	113	first strand
Strand 2	B	95	101	anti-parallel
Strand 3	B	136	146	anti-parallel
Strand 4	B	49	58	anti-parallel
Strand 5	B	163	165	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	B	119	120	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	108	first strand
Strand 2	B	126	130	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	149	first strand
Strand 2	B	168	169	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	14	first strand
Strand 2	A	20	28	anti-parallel
Strand 3	A	192	200	anti-parallel
Strand 4	A	173	182	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	101	first strand
Strand 2	A	136	145	anti-parallel
Strand 3	A	50	57	anti-parallel
Strand 4	A	163	165	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	A	119	120	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	108	first strand
Strand 2	A	126	129	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1001	1002	parallel
Strand 3	C	680	681	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	68	first strand
Strand 2	C	88	98	anti-parallel
Strand 3	C	105	116	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	124	126	first strand
Strand 2	C	129	133	anti-parallel
Strand 3	C	489	491	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	428	431	first strand
Strand 2	C	135	139	anti-parallel
Strand 3	C	506	508	parallel
Strand 4	C	549	551	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	149	first strand
Strand 2	C	155	162	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	173	first strand
Strand 2	C	179	183	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	289	first strand
Strand 2	C	324	327	anti-parallel
Strand 3	C	335	336	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	342	first strand
Strand 2	C	362	363	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	557	558	first strand
Strand 2	C	564	571	anti-parallel
Strand 3	C	579	586	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	557	558	first strand
Strand 2	C	564	571	anti-parallel
Strand 3	C	632	634	anti-parallel
Strand 4	C	596	597	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	614	618	first strand
Strand 2	C	621	625	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	696	697	first strand
Strand 2	C	755	757	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	703	707	first strand
Strand 2	C	711	715	anti-parallel
Strand 3	C	721	725	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	728	731	first strand
Strand 2	C	737	739	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	762	763	first strand
Strand 2	C	766	767	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	939	940	first strand
Strand 2	C	1044	1053	anti-parallel
Strand 3	C	771	777	anti-parallel
Strand 4	C	969	971	parallel
Strand 5	C	789	792	anti-parallel
Strand 6	C	949	953	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	939	940	first strand
Strand 2	C	1044	1053	anti-parallel
Strand 3	C	1028	1029	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	819	820	first strand
Strand 2	C	803	816	anti-parallel
Strand 3	C	919	931	anti-parallel
Strand 4	C	899	908	anti-parallel
Strand 5	C	849	850	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	855	857	first strand
Strand 2	C	891	892	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	860	862	first strand
Strand 2	C	886	888	anti-parallel

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There are 8 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1063	1065	first strand
Strand 2	D	362	369	anti-parallel
Strand 3	D	477	481	anti-parallel
Strand 4	D	433	437	anti-parallel
Strand 5	D	446	454	anti-parallel
Strand 6	D	377	381	parallel
Strand 7	D	459	461	anti-parallel
Strand 8	D	362	369	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1087	1089	first strand
Strand 2	D	357	359	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1154	1157	first strand
Strand 2	D	32	37	anti-parallel
Strand 3	D	1153	1155	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	50	first strand
Strand 2	D	115	125	parallel
Strand 3	D	250	256	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	58	first strand
Strand 2	D	63	64	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	172	173	first strand
Strand 2	D	157	161	anti-parallel
Strand 3	D	190	192	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	264	266	first strand
Strand 2	D	272	274	anti-parallel
Strand 3	F	112	114	parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	538	539	first strand
Strand 2	D	559	568	parallel
Strand 3	D	571	580	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	812	814	first strand
Strand 2	D	897	898	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	823	825	first strand
Strand 2	D	883	885	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	828	829	first strand
Strand 2	D	834	836	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	851	852	first strand
Strand 2	D	859	861	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	980	981	first strand
Strand 2	D	987	992	anti-parallel
Strand 3	D	997	1002	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1091	1093	first strand
Strand 2	D	1075	1080	anti-parallel
Strand 3	D	1113	1116	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1183	1184	first strand
Strand 2	E	69	70	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I24

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I24