Analysis of interatomic Contacts of Structural Units in PDB entry:
8I2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I2H entry

There is 1 chain in PDB entry 8I2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 20LYS 643
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8I2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
210 215Right-handed 310
Helix 2
AA2
A
271 287Right-handed alpha
Helix 3
AA3
A
362 390Right-handed alpha
Helix 4
AA4
A
395 425Right-handed alpha
Helix 5
AA5
A
428 439Right-handed alpha
Helix 6
AA6
A
439 473Right-handed alpha
Helix 7
AA7
A
482 503Right-handed alpha
Helix 8
AA8
A
504 507Right-handed 310
Helix 9
AA9
A
510 514Right-handed 310
Helix 10
AB1
A
524 558Right-handed alpha
Helix 11
AB2
A
564 597Right-handed alpha
Helix 12
AB3
A
603 627Right-handed alpha
Helix 13
AB4
A
630 643Right-handed alpha
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There are 4 sheets in PDB entry 8I2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
29 33anti-parallel
Strand 3
A
50 54parallel
Strand 4
A
74 78parallel
Strand 5
A
99 102parallel
Strand 6
A
124 128parallel
Strand 7
A
147 152parallel
Strand 8
A
173 176parallel
Strand 9
A
195 199parallel
Strand 10
A
222 224parallel
Strand 11
A
243 245parallel
Strand 12
A
266 268parallel
Strand 13
A
345 347parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
85 86parallel
Strand 3
A
110 111parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
116 117parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 160first strand
Strand 2
A
184 185parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il