Analysis of interatomic Contacts of Structural Units in PDB entry:
8I3C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I3C entry

There are 2 chains in PDB entry 8I3C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 35HIS 662
B
 CYS 35HIS 662
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 8I3C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
106 116Right-handed alpha
Helix 2
AA2
A
137 140Right-handed 310
Helix 3
AA3
A
156 169Right-handed alpha
Helix 4
AA4
A
176 181Right-handed alpha
Helix 5
AA5
A
183 189Right-handed alpha
Helix 6
AA6
A
191 195Right-handed 310
Helix 7
AA7
A
208 219Right-handed alpha
Helix 8
AA8
A
240 250Right-handed alpha
Helix 9
AA9
A
250 255Right-handed alpha
Helix 10
AB1
A
271 275Right-handed 310
Helix 11
AB2
A
295 303Right-handed alpha
Helix 12
AB3
A
311 320Right-handed alpha
Helix 13
AB4
A
338 349Right-handed alpha
Helix 14
AB5
A
352 357Right-handed alpha
Helix 15
AB6
A
383 397Right-handed alpha
Helix 16
AB7
A
399 404Right-handed alpha
Helix 17
AB8
A
407 425Right-handed alpha
Helix 18
AB9
A
432 455Right-handed alpha
Helix 19
AC1
A
456 458Right-handed 310
Helix 20
AC2
A
462 471Right-handed alpha
Helix 21
AC3
A
477 492Right-handed alpha
Helix 22
AC4
A
494 503Right-handed alpha
Helix 23
AC5
A
513 541Right-handed alpha
Helix 24
AC6
A
546 561Right-handed alpha
Helix 25
AC7
A
573 578Right-handed 310
Helix 26
AC8
A
580 594Right-handed alpha
Helix 27
AC9
A
597 605Right-handed alpha
Helix 28
AD1
A
623 628Right-handed alpha
Helix 29
AD2
A
634 643Right-handed alpha
Helix 30
AD3
A
643 660Right-handed alpha
Helix 31
AD4
B
106 116Right-handed alpha
Helix 32
AD5
B
137 140Right-handed 310
Helix 33
AD6
B
156 169Right-handed alpha
Helix 34
AD7
B
176 181Right-handed alpha
Helix 35
AD8
B
183 189Right-handed alpha
Helix 36
AD9
B
191 195Right-handed 310
Helix 37
AE1
B
208 219Right-handed alpha
Helix 38
AE2
B
240 250Right-handed alpha
Helix 39
AE3
B
250 255Right-handed alpha
Helix 40
AE4
B
271 275Right-handed 310
Helix 41
AE5
B
295 303Right-handed alpha
Helix 42
AE6
B
311 320Right-handed alpha
Helix 43
AE7
B
338 349Right-handed alpha
Helix 44
AE8
B
352 357Right-handed alpha
Helix 45
AE9
B
383 397Right-handed alpha
Helix 46
AF1
B
399 404Right-handed alpha
Helix 47
AF2
B
407 425Right-handed alpha
Helix 48
AF3
B
432 455Right-handed alpha
Helix 49
AF4
B
456 458Right-handed 310
Helix 50
AF5
B
462 471Right-handed alpha
Helix 51
AF6
B
477 492Right-handed alpha
Helix 52
AF7
B
494 503Right-handed alpha
Helix 53
AF8
B
513 541Right-handed alpha
Helix 54
AF9
B
546 561Right-handed alpha
Helix 55
AG1
B
573 578Right-handed 310
Helix 56
AG2
B
580 594Right-handed alpha
Helix 57
AG3
B
597 605Right-handed alpha
Helix 58
AG4
B
623 628Right-handed alpha
Helix 59
AG5
B
634 643Right-handed alpha
Helix 60
AG6
B
643 660Right-handed alpha
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There are 4 sheets in PDB entry 8I3C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 91first strand
Strand 2
A
40 48anti-parallel
Strand 3
A
123 129anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
227 230parallel
Strand 3
A
259 262parallel
Strand 4
A
96 100parallel
Strand 5
A
277 280parallel
Strand 6
A
288 291anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 91first strand
Strand 2
B
40 48anti-parallel
Strand 3
B
123 129anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 145first strand
Strand 2
B
227 230parallel
Strand 3
B
259 262parallel
Strand 4
B
96 100parallel
Strand 5
B
277 280parallel
Strand 6
B
288 291anti-parallel
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