Analysis of interatomic Contacts of Structural Units in PDB entry:
8I3G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I3G entry

There are 4 chains in PDB entry 8I3G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 218MET 401
B
 ILE 220MET 401
C
 LEU 111LYS 142
D
 GLU 108LYS 142
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8I3G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
225 241Right-handed alpha
Helix 2
AA2
A
253 266Right-handed alpha
Helix 3
AA3
A
267 269Right-handed 310
Helix 4
AA4
A
271 297Right-handed alpha
Helix 5
AA5
A
299 301Right-handed 310
Helix 6
AA6
A
302 316Right-handed alpha
Helix 7
AA7
A
321 325Right-handed 310
Helix 8
AA8
A
327 344Right-handed alpha
Helix 9
AA9
A
348 369Right-handed alpha
Helix 10
AB1
A
369 374Right-handed alpha
Helix 11
AB2
B
225 241Right-handed alpha
Helix 12
AB3
B
253 269Right-handed alpha
Helix 13
AB4
B
271 297Right-handed alpha
Helix 14
AB5
B
299 301Right-handed 310
Helix 15
AB6
B
302 317Right-handed alpha
Helix 16
AB7
B
321 325Right-handed 310
Helix 17
AB8
B
327 344Right-handed alpha
Helix 18
AB9
B
348 369Right-handed alpha
Helix 19
AC1
B
369 375Right-handed alpha
Helix 20
AC2
B
391 400Right-handed alpha
Helix 21
AC3
C
112 117Right-handed 310
Helix 22
AC4
C
128 142Right-handed alpha
Helix 23
AC5
D
110 115Right-handed alpha
Helix 24
AC6
D
129 141Right-handed alpha
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There are 2 sheets in PDB entry 8I3G. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 398first strand
Strand 2
D
127 128parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
244 246first strand
Strand 2
B
387 389anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il