Analysis of interatomic Contacts of Structural Units in PDB entry:
8I3W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I3W entry

There are 3 chains in PDB entry 8I3W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 15	VAL 1129
B	GLN 15	VAL 1129
C	GLN 15	VAL 1129

There are 74 helices in PDB entry 8I3W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	71	75	Right-handed 310
Helix 2	AA2	A	290	300	Right-handed alpha
Helix 3	AA3	A	360	365	Right-handed 310
Helix 4	AA4	A	379	385	Right-handed 310
Helix 5	AA5	A	401	406	Right-handed 310
Helix 6	AA6	A	412	418	Right-handed alpha
Helix 7	AA7	A	615	620	Right-handed alpha
Helix 8	AA8	A	626	631	Right-handed alpha
Helix 9	AA9	A	729	735	Right-handed alpha
Helix 10	AB1	A	738	749	Right-handed alpha
Helix 11	AB2	A	750	774	Right-handed alpha
Helix 12	AB3	A	808	817	Right-handed alpha
Helix 13	AB4	A	828	834	Right-handed alpha
Helix 14	AB5	A	840	848	Right-handed alpha
Helix 15	AB6	A	858	876	Right-handed alpha
Helix 16	AB7	A	878	882	Right-handed 310
Helix 17	AB8	A	889	900	Right-handed alpha
Helix 18	AB9	A	904	933	Right-handed alpha
Helix 19	AC1	A	937	957	Right-handed alpha
Helix 20	AC2	A	958	960	Right-handed 310
Helix 21	AC3	A	968	974	Right-handed alpha
Helix 22	AC4	A	977	1025	Right-handed alpha
Helix 23	AC5	A	1074	1076	Right-handed 310
Helix 24	AC6	B	72	75	Right-handed 310
Helix 25	AC7	B	290	300	Right-handed alpha
Helix 26	AC8	B	347	349	Right-handed 310
Helix 27	AC9	B	360	365	Right-handed 310
Helix 28	AD1	B	379	383	Right-handed 310
Helix 29	AD2	B	401	406	Right-handed 310
Helix 30	AD3	B	412	418	Right-handed alpha
Helix 31	AD4	B	615	620	Right-handed alpha
Helix 32	AD5	B	621	625	Right-handed 310
Helix 33	AD6	B	626	632	Right-handed alpha
Helix 34	AD7	B	729	735	Right-handed alpha
Helix 35	AD8	B	738	749	Right-handed alpha
Helix 36	AD9	B	750	775	Right-handed alpha
Helix 37	AE1	B	808	818	Right-handed alpha
Helix 38	AE2	B	828	834	Right-handed alpha
Helix 39	AE3	B	840	848	Right-handed alpha
Helix 40	AE4	B	858	876	Right-handed alpha
Helix 41	AE5	B	878	882	Right-handed 310
Helix 42	AE6	B	889	900	Right-handed alpha
Helix 43	AE7	B	904	910	Right-handed 310
Helix 44	AE8	B	911	933	Right-handed alpha
Helix 45	AE9	B	937	957	Right-handed alpha
Helix 46	AF1	B	958	960	Right-handed 310
Helix 47	AF2	B	968	974	Right-handed alpha
Helix 48	AF3	B	977	1024	Right-handed alpha
Helix 49	AF4	B	1074	1076	Right-handed 310
Helix 50	AF5	C	72	75	Right-handed 310
Helix 51	AF6	C	290	300	Right-handed alpha
Helix 52	AF7	C	360	367	Right-handed 310
Helix 53	AF8	C	379	385	Right-handed 310
Helix 54	AF9	C	401	406	Right-handed 310
Helix 55	AG1	C	412	418	Right-handed alpha
Helix 56	AG2	C	498	501	Right-handed 310
Helix 57	AG3	C	612	614	Right-handed 310
Helix 58	AG4	C	615	621	Right-handed alpha
Helix 59	AG5	C	622	625	Right-handed 310
Helix 60	AG6	C	626	632	Right-handed alpha
Helix 61	AG7	C	729	735	Right-handed alpha
Helix 62	AG8	C	738	749	Right-handed alpha
Helix 63	AG9	C	750	774	Right-handed alpha
Helix 64	AH1	C	808	818	Right-handed alpha
Helix 65	AH2	C	828	834	Right-handed alpha
Helix 66	AH3	C	840	848	Right-handed alpha
Helix 67	AH4	C	858	876	Right-handed alpha
Helix 68	AH5	C	878	882	Right-handed 310
Helix 69	AH6	C	889	900	Right-handed alpha
Helix 70	AH7	C	907	933	Right-handed alpha
Helix 71	AH8	C	937	957	Right-handed alpha
Helix 72	AH9	C	958	960	Right-handed 310
Helix 73	AI1	C	968	974	Right-handed alpha
Helix 74	AI2	C	977	1025	Right-handed alpha

There are 55 sheets in PDB entry 8I3W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	31	first strand
Strand 2	A	62	68	anti-parallel
Strand 3	A	259	265	anti-parallel
Strand 4	A	90	96	anti-parallel
Strand 5	A	185	196	anti-parallel
Strand 6	A	199	211	anti-parallel
Strand 7	A	223	228	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	37	first strand
Strand 2	A	219	221	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	56	first strand
Strand 2	A	267	275	anti-parallel
Strand 3	A	281	286	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	236	245	anti-parallel
Strand 3	A	141	145	parallel
Strand 4	A	151	152	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	236	245	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	126	135	anti-parallel
Strand 6	A	159	169	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	310	first strand
Strand 2	A	591	595	anti-parallel
Strand 3	A	605	609	anti-parallel
Strand 4	A	644	647	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	323	first strand
Strand 2	A	534	538	parallel
Strand 3	A	543	550	anti-parallel
Strand 4	A	580	585	anti-parallel
Strand 5	A	571	573	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	358	first strand
Strand 2	A	520	521	parallel
Strand 3	A	387	388	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	392	first strand
Strand 2	A	503	512	anti-parallel
Strand 3	A	395	399	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	392	first strand
Strand 2	A	503	512	anti-parallel
Strand 3	A	428	433	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	450	first strand
Strand 2	A	488	490	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	470	first strand
Strand 2	A	484	485	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	650	651	first strand
Strand 2	A	683	688	parallel
Strand 3	A	666	671	anti-parallel
Strand 4	A	660	661	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	703	705	first strand
Strand 2	A	1066	1069	anti-parallel
Strand 3	A	1088	1089	anti-parallel
Strand 4	A	1094	1095	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	710	first strand
Strand 2	A	1061	1062	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	720	first strand
Strand 2	A	1051	1058	anti-parallel
Strand 3	A	1040	1042	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	720	first strand
Strand 2	A	1051	1058	anti-parallel
Strand 3	A	1045	1048	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	726	728	first strand
Strand 2	A	850	852	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1078	1082	first strand
Strand 2	A	1112	1117	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	62	70	anti-parallel
Strand 3	B	77	78	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	62	70	anti-parallel
Strand 3	B	259	265	anti-parallel
Strand 4	B	90	96	anti-parallel
Strand 5	B	185	196	anti-parallel
Strand 6	B	199	211	anti-parallel
Strand 7	B	223	228	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	56	first strand
Strand 2	B	267	275	anti-parallel
Strand 3	B	281	286	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	236	245	anti-parallel
Strand 3	B	141	145	parallel
Strand 4	B	151	153	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	236	245	anti-parallel
Strand 3	B	101	107	anti-parallel
Strand 4	B	116	120	anti-parallel
Strand 5	B	127	135	anti-parallel
Strand 6	B	159	170	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	310	first strand
Strand 2	B	592	595	anti-parallel
Strand 3	B	605	609	anti-parallel
Strand 4	B	644	647	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	321	323	first strand
Strand 2	B	534	538	parallel
Strand 3	B	543	550	anti-parallel
Strand 4	B	580	585	anti-parallel
Strand 5	B	571	573	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	344	345	first strand
Strand 2	B	395	399	parallel
Strand 3	B	503	512	anti-parallel
Strand 4	B	428	433	anti-parallel
Strand 5	B	372	375	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	344	345	first strand
Strand 2	B	395	399	parallel
Strand 3	B	503	512	anti-parallel
Strand 4	B	390	392	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	358	first strand
Strand 2	B	520	521	parallel
Strand 3	B	387	388	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	450	first strand
Strand 2	B	488	490	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	469	470	first strand
Strand 2	B	484	485	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	650	651	first strand
Strand 2	B	683	688	parallel
Strand 3	B	666	671	anti-parallel
Strand 4	B	660	661	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	703	705	first strand
Strand 2	B	1066	1069	anti-parallel
Strand 3	B	1088	1089	anti-parallel
Strand 4	B	1094	1095	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	720	first strand
Strand 2	B	1051	1058	anti-parallel
Strand 3	B	1040	1048	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	726	728	first strand
Strand 2	B	850	852	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	779	780	first strand
Strand 2	C	693	694	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1078	1082	first strand
Strand 2	B	1112	1117	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	62	70	anti-parallel
Strand 3	C	77	78	anti-parallel

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There are 7 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	62	70	anti-parallel
Strand 3	C	259	265	anti-parallel
Strand 4	C	90	96	anti-parallel
Strand 5	C	185	196	anti-parallel
Strand 6	C	199	211	anti-parallel
Strand 7	C	223	228	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	56	first strand
Strand 2	C	267	275	anti-parallel
Strand 3	C	281	286	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	236	245	anti-parallel
Strand 3	C	134	144	parallel
Strand 4	C	157	161	anti-parallel

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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	236	245	anti-parallel
Strand 3	C	101	107	anti-parallel
Strand 4	C	116	120	anti-parallel
Strand 5	C	126	131	anti-parallel
Strand 6	C	167	171	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	307	310	first strand
Strand 2	C	592	595	anti-parallel
Strand 3	C	605	609	anti-parallel
Strand 4	C	644	647	anti-parallel

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There are 6 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	321	323	first strand
Strand 2	C	534	538	parallel
Strand 3	C	543	550	anti-parallel
Strand 4	C	580	585	anti-parallel
Strand 5	C	569	573	anti-parallel
Strand 6	C	561	563	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	358	first strand
Strand 2	C	520	521	parallel
Strand 3	C	387	388	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	390	392	first strand
Strand 2	C	503	512	anti-parallel
Strand 3	C	395	399	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	390	392	first strand
Strand 2	C	503	512	anti-parallel
Strand 3	C	428	433	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	448	450	first strand
Strand 2	C	488	490	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	469	470	first strand
Strand 2	C	484	485	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	650	651	first strand
Strand 2	C	683	688	parallel
Strand 3	C	666	671	anti-parallel
Strand 4	C	660	661	anti-parallel

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There are 5 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	703	705	first strand
Strand 2	C	1066	1069	anti-parallel
Strand 3	C	1088	1089	anti-parallel
Strand 4	C	1094	1097	anti-parallel
Strand 5	C	1104	1105	anti-parallel

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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	713	720	first strand
Strand 2	C	1051	1058	anti-parallel
Strand 3	C	1040	1042	anti-parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	713	720	first strand
Strand 2	C	1051	1058	anti-parallel
Strand 3	C	1045	1048	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	726	728	first strand
Strand 2	C	850	852	anti-parallel

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There are 3 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1073	1075	first strand
Strand 2	C	1078	1082	anti-parallel
Strand 3	C	1112	1117	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I3W

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I3W