Analysis of interatomic Contacts of Structural Units in PDB entry:
8I4V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I4V entry

There are 4 chains in PDB entry 8I4V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 232GLN 906
B
 ALA 287GLU 930
C
 ASN 4GLN 254
D
 PRO 87ASP 150
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8I4V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
232 268Right-handed alpha
Helix 2
AA2
A
271 364Right-handed alpha
Helix 3
AA3
A
747 769Right-handed alpha
Helix 4
AA4
A
770 781Right-handed alpha
Helix 5
AA5
A
782 825Right-handed alpha
Helix 6
AA6
A
827 833Right-handed alpha
Helix 7
AA7
A
835 843Right-handed alpha
Helix 8
AA8
A
846 863Right-handed alpha
Helix 9
AA9
A
866 882Right-handed alpha
Helix 10
AB1
A
890 904Right-handed alpha
Helix 11
AB2
B
288 401Right-handed alpha
Helix 12
AB3
B
792 882Right-handed alpha
Helix 13
AB4
B
896 919Right-handed alpha
Helix 14
AB5
B
921 930Right-handed alpha
Helix 15
AB6
C
15 25Right-handed alpha
Helix 16
AB7
C
30 52Right-handed alpha
Helix 17
AB8
C
59 101Right-handed alpha
Helix 18
AB9
C
107 114Right-handed alpha
Helix 19
AC1
C
121 129Right-handed alpha
Helix 20
AC2
C
141 156Right-handed alpha
Helix 21
AC3
C
208 214Right-handed alpha
Helix 22
AC4
C
238 254Right-handed alpha
Helix 23
AC5
D
88 94Right-handed alpha
Helix 24
AC6
D
131 150Right-handed alpha
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There are 2 sheets in PDB entry 8I4V. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
203 204first strand
Strand 2
C
195 197anti-parallel
Strand 3
C
235 237anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
219 220first strand
Strand 2
C
229 230anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il