Analysis of interatomic Contacts of Structural Units in PDB entry:
8I5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I5C entry

There are 50 chains in PDB entry 8I5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1TRP 274
B
 ILE 1MET 99
C
 VAL 1LYS 9
D
 GLN 2PRO 199
E
 ALA 3ASP 242
F
 GLY 1TRP 274
G
 ILE 1MET 99
H
 VAL 1LYS 9
I
 GLN 2PRO 199
J
 ALA 3ASP 242
K
 GLY 1TRP 274
L
 ILE 1MET 99
M
 VAL 1LYS 9
N
 GLN 2PRO 199
O
 ALA 3ASP 242
P
 GLY 1TRP 274
Q
 ILE 1MET 99
R
 VAL 1LYS 9
S
 GLN 2PRO 199
T
 ALA 3ASP 242
U
 GLY 1TRP 274
V
 ILE 1MET 99
W
 VAL 1LYS 9
X
 GLN 2PRO 199
Y
 ALA 3ASP 242
Z
 GLY 1TRP 274
a
 ILE 1MET 99
b
 VAL 1LYS 9
c
 GLN 2PRO 199
d
 ALA 3ASP 242
e
 GLY 1TRP 274
f
 ILE 1MET 99
g
 VAL 1LYS 9
h
 GLN 2PRO 199
i
 ALA 3ASP 242
j
 GLY 1TRP 274
k
 ILE 1MET 99
l
 VAL 1LYS 9
m
 GLN 2PRO 199
n
 ALA 3ASP 242
o
 GLY 1TRP 274
p
 ILE 1MET 99
q
 VAL 1LYS 9
r
 GLN 2PRO 199
s
 ALA 3ASP 242
t
 GLY 1TRP 274
u
 ILE 1ASP 98
v
 VAL 1LYS 9
w
 GLN 2PRO 199
x
 ALA 3ASP 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are113 helices in PDB entry 8I5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 53Right-handed 310
Helix 2
AA2
A
56 86Right-handed alpha
Helix 3
AA3
A
137 149Right-handed alpha
Helix 4
AA4
A
151 161Right-handed alpha
Helix 5
AA5
A
162 175Right-handed alpha
Helix 6
AA6
A
175 180Right-handed alpha
Helix 7
AA7
A
253 255Right-handed 310
Helix 8
AA8
D
80 84Right-handed 310
Helix 9
AA9
E
82 86Right-handed 310
Helix 10
AB1
E
114 118Right-handed 310
Helix 11
AB2
E
129 137Right-handed alpha
Helix 12
AB3
E
196 201Right-handed alpha
Helix 13
AB4
F
49 53Right-handed 310
Helix 14
AB5
F
56 86Right-handed alpha
Helix 15
AB6
F
137 150Right-handed alpha
Helix 16
AB7
F
151 162Right-handed alpha
Helix 17
AB8
F
162 175Right-handed alpha
Helix 18
AB9
F
175 180Right-handed alpha
Helix 19
AC1
F
253 255Right-handed 310
Helix 20
AC2
I
80 84Right-handed 310
Helix 21
AC3
J
82 86Right-handed 310
Helix 22
AC4
J
129 137Right-handed alpha
Helix 23
AC5
J
196 201Right-handed alpha
Helix 24
AC6
K
49 53Right-handed 310
Helix 25
AC7
K
56 86Right-handed alpha
Helix 26
AC8
K
137 150Right-handed alpha
Helix 27
AC9
K
151 162Right-handed alpha
Helix 28
AD1
K
162 175Right-handed alpha
Helix 29
AD2
K
175 180Right-handed alpha
Helix 30
AD3
K
253 255Right-handed 310
Helix 31
AD4
N
80 84Right-handed 310
Helix 32
AD5
O
82 86Right-handed 310
Helix 33
AD6
O
114 118Right-handed 310
Helix 34
AD7
O
129 137Right-handed alpha
Helix 35
AD8
O
196 201Right-handed alpha
Helix 36
AD9
P
49 53Right-handed 310
Helix 37
AE1
P
56 86Right-handed alpha
Helix 38
AE2
P
137 150Right-handed alpha
Helix 39
AE3
P
151 162Right-handed alpha
Helix 40
AE4
P
162 175Right-handed alpha
Helix 41
AE5
P
175 180Right-handed alpha
Helix 42
AE6
S
80 84Right-handed 310
Helix 43
AE7
T
82 86Right-handed 310
Helix 44
AE8
T
114 118Right-handed 310
Helix 45
AE9
T
129 137Right-handed alpha
Helix 46
AF1
T
196 201Right-handed alpha
Helix 47
AF2
U
49 53Right-handed 310
Helix 48
AF3
U
56 86Right-handed alpha
Helix 49
AF4
U
137 150Right-handed alpha
Helix 50
AF5
U
151 161Right-handed alpha
Helix 51
AF6
U
162 175Right-handed alpha
Helix 52
AF7
U
175 180Right-handed alpha
Helix 53
AF8
X
80 84Right-handed 310
Helix 54
AF9
Y
82 86Right-handed 310
Helix 55
AG1
Y
114 118Right-handed 310
Helix 56
AG2
Y
129 137Right-handed alpha
Helix 57
AG3
Y
196 201Right-handed alpha
Helix 58
AG4
Z
49 53Right-handed 310
Helix 59
AG5
Z
56 86Right-handed alpha
Helix 60
AG6
Z
137 150Right-handed alpha
Helix 61
AG7
Z
151 162Right-handed alpha
Helix 62
AG8
Z
162 175Right-handed alpha
Helix 63
AG9
Z
175 180Right-handed alpha
Helix 64
AH1
Z
253 255Right-handed 310
Helix 65
AH2
c
80 84Right-handed 310
Helix 66
AH3
d
82 86Right-handed 310
Helix 67
AH4
d
129 137Right-handed alpha
Helix 68
AH5
d
196 201Right-handed alpha
Helix 69
AH6
e
49 53Right-handed 310
Helix 70
AH7
e
56 86Right-handed alpha
Helix 71
AH8
e
137 150Right-handed alpha
Helix 72
AH9
e
151 162Right-handed alpha
Helix 73
AI1
e
162 175Right-handed alpha
Helix 74
AI2
e
175 180Right-handed alpha
Helix 75
AI3
e
253 255Right-handed 310
Helix 76
AI4
h
80 84Right-handed 310
Helix 77
AI5
i
82 86Right-handed 310
Helix 78
AI6
i
129 137Right-handed alpha
Helix 79
AI7
i
196 201Right-handed alpha
Helix 80
AI8
j
49 53Right-handed 310
Helix 81
AI9
j
56 86Right-handed alpha
Helix 82
AJ1
j
137 150Right-handed alpha
Helix 83
AJ2
j
151 162Right-handed alpha
Helix 84
AJ3
j
162 175Right-handed alpha
Helix 85
AJ4
j
175 180Right-handed alpha
Helix 86
AJ5
j
253 255Right-handed 310
Helix 87
AJ6
m
80 84Right-handed 310
Helix 88
AJ7
n
82 86Right-handed 310
Helix 89
AJ8
n
129 137Right-handed alpha
Helix 90
AJ9
n
196 201Right-handed alpha
Helix 91
AK1
o
49 53Right-handed 310
Helix 92
AK2
o
56 86Right-handed alpha
Helix 93
AK3
o
137 150Right-handed alpha
Helix 94
AK4
o
151 162Right-handed alpha
Helix 95
AK5
o
162 175Right-handed alpha
Helix 96
AK6
o
175 180Right-handed alpha
Helix 97
AK7
o
253 255Right-handed 310
Helix 98
AK8
r
80 84Right-handed 310
Helix 99
AK9
s
82 86Right-handed 310
Helix 100
AL1
s
114 118Right-handed 310
Helix 101
AL2
s
129 137Right-handed alpha
Helix 102
AL3
s
196 201Right-handed alpha
Helix 103
AL4
t
49 53Right-handed 310
Helix 104
AL5
t
56 86Right-handed alpha
Helix 105
AL6
t
137 150Right-handed alpha
Helix 106
AL7
t
151 162Right-handed alpha
Helix 107
AL8
t
162 175Right-handed alpha
Helix 108
AL9
t
175 180Right-handed alpha
Helix 109
AM1
t
253 255Right-handed 310
Helix 110
AM2
w
80 84Right-handed 310
Helix 111
AM3
x
82 86Right-handed 310
Helix 112
AM4
x
129 137Right-handed alpha
Helix 113
AM5
x
196 201Right-handed alpha
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