Analysis of interatomic Contacts of Structural Units in PDB entry:
8I5H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I5H entry

There are 9 chains in PDB entry 8I5H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
R	ASN 334	PRO 527
H	GLU 1	PRO 217
L	ALA 1	GLU 214
A	ASN 334	PRO 527
B	GLU 1	PRO 217
C	ALA 1	GLU 214
D	ASN 334	PRO 527
E	GLU 1	PRO 217
F	ALA 1	GLU 214

There are 50 helices in PDB entry 8I5H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	R	337	343	Right-handed alpha
Helix 2	AA2	R	365	370	Right-handed alpha
Helix 3	AA3	R	386	389	Right-handed 310
Helix 4	AA4	R	405	410	Right-handed 310
Helix 5	AA5	R	416	422	Right-handed alpha
Helix 6	AA6	R	438	443	Right-handed alpha
Helix 7	AA7	R	502	505	Right-handed 310
Helix 8	AA8	H	28	32	Right-handed 310
Helix 9	AA9	H	61	64	Right-handed 310
Helix 10	AB1	H	86	90	Right-handed 310
Helix 11	AB2	H	100	102	Right-handed 310
Helix 12	AB3	H	160	162	Right-handed 310
Helix 13	AB4	H	191	193	Right-handed 310
Helix 14	AB5	H	205	208	Right-handed 310
Helix 15	AB6	L	79	83	Right-handed 310
Helix 16	AB7	L	122	129	Right-handed alpha
Helix 17	AB8	L	184	189	Right-handed alpha
Helix 18	AB9	A	337	343	Right-handed alpha
Helix 19	AC1	A	365	370	Right-handed alpha
Helix 20	AC2	A	385	389	Right-handed 310
Helix 21	AC3	A	405	410	Right-handed 310
Helix 22	AC4	A	416	422	Right-handed alpha
Helix 23	AC5	A	438	443	Right-handed alpha
Helix 24	AC6	A	502	505	Right-handed 310
Helix 25	AC7	B	28	32	Right-handed 310
Helix 26	AC8	B	86	90	Right-handed 310
Helix 27	AC9	B	100	102	Right-handed 310
Helix 28	AD1	B	160	162	Right-handed 310
Helix 29	AD2	B	191	195	Right-handed 310
Helix 30	AD3	B	205	208	Right-handed 310
Helix 31	AD4	C	79	83	Right-handed 310
Helix 32	AD5	C	122	128	Right-handed alpha
Helix 33	AD6	C	184	189	Right-handed alpha
Helix 34	AD7	D	337	343	Right-handed alpha
Helix 35	AD8	D	349	353	Right-handed 310
Helix 36	AD9	D	365	370	Right-handed alpha
Helix 37	AE1	D	386	390	Right-handed 310
Helix 38	AE2	D	405	410	Right-handed 310
Helix 39	AE3	D	416	422	Right-handed alpha
Helix 40	AE4	D	438	443	Right-handed alpha
Helix 41	AE5	D	502	505	Right-handed 310
Helix 42	AE6	E	28	32	Right-handed 310
Helix 43	AE7	E	61	64	Right-handed 310
Helix 44	AE8	E	86	90	Right-handed 310
Helix 45	AE9	E	160	162	Right-handed 310
Helix 46	AF1	E	189	194	Right-handed 310
Helix 47	AF2	E	205	208	Right-handed 310
Helix 48	AF3	F	79	83	Right-handed 310
Helix 49	AF4	F	122	128	Right-handed alpha
Helix 50	AF5	F	184	189	Right-handed alpha

There are 44 sheets in PDB entry 8I5H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	354	358	first strand
Strand 2	R	394	403	anti-parallel
Strand 3	R	507	516	anti-parallel
Strand 4	R	431	437	anti-parallel
Strand 5	R	376	380	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	361	362	first strand
Strand 2	R	524	525	parallel
Strand 3	R	391	392	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	452	454	first strand
Strand 2	R	492	494	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	473	474	first strand
Strand 2	R	488	489	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	111	115	parallel
Strand 3	H	91	98	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	111	115	parallel
Strand 3	H	91	98	anti-parallel
Strand 4	H	104	107	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	124	128	first strand
Strand 2	H	139	149	anti-parallel
Strand 3	H	180	189	anti-parallel
Strand 4	H	167	169	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	124	128	first strand
Strand 2	H	139	149	anti-parallel
Strand 3	H	180	189	anti-parallel
Strand 4	H	173	174	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	155	158	first strand
Strand 2	H	199	204	anti-parallel
Strand 3	H	209	214	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	70	75	anti-parallel
Strand 4	L	62	67	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	14	first strand
Strand 2	L	103	108	parallel
Strand 3	L	84	90	anti-parallel
Strand 4	L	33	38	anti-parallel
Strand 5	L	45	49	anti-parallel
Strand 6	L	53	54	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	115	119	first strand
Strand 2	L	130	140	anti-parallel
Strand 3	L	174	183	anti-parallel
Strand 4	L	160	164	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	154	155	first strand
Strand 2	L	146	151	anti-parallel
Strand 3	L	192	198	anti-parallel
Strand 4	L	206	211	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	403	anti-parallel
Strand 3	A	507	516	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	380	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	524	525	parallel
Strand 3	A	391	392	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	7	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	77	82	anti-parallel
Strand 4	B	67	72	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	111	115	parallel
Strand 3	B	91	98	anti-parallel
Strand 4	B	33	39	anti-parallel
Strand 5	B	46	51	anti-parallel
Strand 6	B	57	59	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	111	115	parallel
Strand 3	B	91	98	anti-parallel
Strand 4	B	104	107	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	128	first strand
Strand 2	B	139	149	anti-parallel
Strand 3	B	180	189	anti-parallel
Strand 4	B	167	169	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	128	first strand
Strand 2	B	139	149	anti-parallel
Strand 3	B	180	189	anti-parallel
Strand 4	B	173	174	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	155	158	first strand
Strand 2	B	198	204	anti-parallel
Strand 3	B	209	215	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	19	25	anti-parallel
Strand 3	C	70	75	anti-parallel
Strand 4	C	62	67	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	14	first strand
Strand 2	C	103	108	parallel
Strand 3	C	84	90	anti-parallel
Strand 4	C	33	38	anti-parallel
Strand 5	C	45	49	anti-parallel
Strand 6	C	53	54	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	14	first strand
Strand 2	C	103	108	parallel
Strand 3	C	84	90	anti-parallel
Strand 4	C	98	99	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	115	119	first strand
Strand 2	C	130	140	anti-parallel
Strand 3	C	174	183	anti-parallel
Strand 4	C	160	164	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	155	first strand
Strand 2	C	146	151	anti-parallel
Strand 3	C	192	198	anti-parallel
Strand 4	C	206	211	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	358	first strand
Strand 2	D	394	403	anti-parallel
Strand 3	D	507	516	anti-parallel
Strand 4	D	431	437	anti-parallel
Strand 5	D	376	379	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	361	362	first strand
Strand 2	D	524	525	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	454	first strand
Strand 2	D	492	494	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	474	first strand
Strand 2	D	488	489	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	7	first strand
Strand 2	E	18	25	anti-parallel
Strand 3	E	77	82	anti-parallel
Strand 4	E	67	72	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	111	115	parallel
Strand 3	E	91	98	anti-parallel
Strand 4	E	33	39	anti-parallel
Strand 5	E	45	51	anti-parallel
Strand 6	E	57	59	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	111	115	parallel
Strand 3	E	91	98	anti-parallel
Strand 4	E	104	107	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	124	128	first strand
Strand 2	E	140	149	anti-parallel
Strand 3	E	180	188	anti-parallel
Strand 4	E	167	169	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	124	128	first strand
Strand 2	E	140	149	anti-parallel
Strand 3	E	180	188	anti-parallel
Strand 4	E	173	174	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	155	158	first strand
Strand 2	E	199	204	anti-parallel
Strand 3	E	209	214	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	6	first strand
Strand 2	F	23	25	anti-parallel
Strand 3	F	70	75	anti-parallel
Strand 4	F	19	20	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	6	first strand
Strand 2	F	23	25	anti-parallel
Strand 3	F	70	75	anti-parallel
Strand 4	F	62	66	anti-parallel

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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	103	107	parallel
Strand 3	F	84	90	anti-parallel
Strand 4	F	33	38	anti-parallel
Strand 5	F	45	49	anti-parallel
Strand 6	F	53	54	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	115	119	first strand
Strand 2	F	130	140	anti-parallel
Strand 3	F	174	183	anti-parallel
Strand 4	F	160	164	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	154	156	first strand
Strand 2	F	146	151	anti-parallel
Strand 3	F	192	198	anti-parallel
Strand 4	F	206	211	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I5H

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I5H