Analysis of interatomic Contacts of Structural Units in PDB entry:
8I5V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I5V entry

There are 2 chains in PDB entry 8I5V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1875THR 2150
B
 MET 1LEU 177
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8I5V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1905 1922Right-handed alpha
Helix 2
AA2
A
1936 1940Right-handed 310
Helix 3
AA3
A
1957 1964Right-handed alpha
Helix 4
AA4
A
1966 1970Right-handed 310
Helix 5
AA5
A
2027 2049Right-handed alpha
Helix 6
AA6
A
2053 2066Right-handed alpha
Helix 7
AA7
A
2073 2081Right-handed alpha
Helix 8
AA8
A
2090 2119Right-handed alpha
Helix 9
AA9
A
2120 2122Right-handed 310
Helix 10
AB1
A
2123 2146Right-handed alpha
Helix 11
AB2
B
15 26Right-handed alpha
Helix 12
AB3
B
28 32Right-handed 310
Helix 13
AB4
B
61 65Right-handed 310
Helix 14
AB5
B
67 72Right-handed 310
Helix 15
AB6
B
86 96Right-handed alpha
Helix 16
AB7
B
96 105Right-handed alpha
Helix 17
AB8
B
116 120Right-handed 310
Helix 18
AB9
B
122 131Right-handed alpha
Helix 19
AC1
B
138 150Right-handed alpha
Helix 20
AC2
B
164 175Right-handed alpha
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There are 2 sheets in PDB entry 8I5V. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1926 1929first strand
Strand 2
A
1945 1954parallel
Strand 3
A
1974 1983anti-parallel
Strand 4
A
1997 2009anti-parallel
Strand 5
A
2015 2026anti-parallel
Strand 6
A
1895 1900anti-parallel
Strand 7
A
1876 1883anti-parallel
Strand 8
A
1945 1954anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 46first strand
Strand 2
B
49 57anti-parallel
Strand 3
B
2 10parallel
Strand 4
B
77 83parallel
Strand 5
B
110 115parallel
Strand 6
B
153 156parallel
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