Analysis of interatomic Contacts of Structural Units in PDB entry:
8I6I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I6I entry

There are 2 chains in PDB entry 8I6I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 12LEU 459
C
 TYR 12LEU 459
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 8I6I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 35Right-handed alpha
Helix 2
AA2
A
76 85Right-handed alpha
Helix 3
AA3
A
120 139Right-handed alpha
Helix 4
AA4
A
142 146Right-handed 310
Helix 5
AA5
A
148 154Right-handed alpha
Helix 6
AA6
A
156 165Right-handed alpha
Helix 7
AA7
A
167 182Right-handed alpha
Helix 8
AA8
A
190 201Right-handed alpha
Helix 9
AA9
A
203 208Right-handed alpha
Helix 10
AB1
A
224 235Right-handed alpha
Helix 11
AB2
A
273 278Right-handed alpha
Helix 12
AB3
A
287 297Right-handed alpha
Helix 13
AB4
A
312 317Right-handed 310
Helix 14
AB5
A
352 360Right-handed alpha
Helix 15
AB6
A
362 379Right-handed alpha
Helix 16
AB7
A
380 384Right-handed 310
Helix 17
AB8
A
410 416Right-handed alpha
Helix 18
AB9
A
417 420Right-handed 310
Helix 19
AC1
A
430 434Right-handed 310
Helix 20
AC2
A
440 459Right-handed alpha
Helix 21
AC3
C
22 35Right-handed alpha
Helix 22
AC4
C
76 85Right-handed alpha
Helix 23
AC5
C
120 139Right-handed alpha
Helix 24
AC6
C
142 146Right-handed 310
Helix 25
AC7
C
148 154Right-handed alpha
Helix 26
AC8
C
156 165Right-handed alpha
Helix 27
AC9
C
167 182Right-handed alpha
Helix 28
AD1
C
190 201Right-handed alpha
Helix 29
AD2
C
203 208Right-handed alpha
Helix 30
AD3
C
224 235Right-handed alpha
Helix 31
AD4
C
273 278Right-handed alpha
Helix 32
AD5
C
287 297Right-handed alpha
Helix 33
AD6
C
312 317Right-handed 310
Helix 34
AD7
C
352 359Right-handed alpha
Helix 35
AD8
C
362 379Right-handed alpha
Helix 36
AD9
C
380 384Right-handed 310
Helix 37
AE1
C
410 416Right-handed alpha
Helix 38
AE2
C
417 420Right-handed 310
Helix 39
AE3
C
430 434Right-handed 310
Helix 40
AE4
C
440 459Right-handed alpha
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There are 10 sheets in PDB entry 8I6I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
39 42parallel
Strand 3
A
16 19parallel
Strand 4
A
267 270parallel
Strand 5
A
426 428parallel
Strand 6
A
422 423anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
64 65anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
217 219anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 108first strand
Strand 2
A
97 102anti-parallel
Strand 3
A
319 326parallel
Strand 4
A
331 335anti-parallel
Strand 5
A
344 351anti-parallel
Strand 6
A
302 309anti-parallel
Strand 7
A
387 392anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 265first strand
Strand 2
A
253 258anti-parallel
Strand 3
A
246 250anti-parallel
Strand 4
A
281 283parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
238 239first strand
Strand 2
C
39 42parallel
Strand 3
C
16 19parallel
Strand 4
C
267 270parallel
Strand 5
C
426 428parallel
Strand 6
C
422 423anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 55first strand
Strand 2
C
64 65anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
89 91first strand
Strand 2
C
217 219anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
105 108first strand
Strand 2
C
97 102anti-parallel
Strand 3
C
319 326parallel
Strand 4
C
331 335anti-parallel
Strand 5
C
344 351anti-parallel
Strand 6
C
302 309anti-parallel
Strand 7
C
387 392anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
261 265first strand
Strand 2
C
254 258anti-parallel
Strand 3
C
246 249anti-parallel
Strand 4
C
281 283parallel
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