Analysis of interatomic Contacts of Structural Units in PDB entry:
8I6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I6O entry

There are 5 chains in PDB entry 8I6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35ARG 335
B
 MET 1GLU 222
C
 SER 35ARG 335
D
 MET 1GLU 222
E
 SER 51ALA 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 8I6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 54Right-handed alpha
Helix 2
AA2
A
55 84Right-handed alpha
Helix 3
AA3
A
86 91Right-handed alpha
Helix 4
AA4
A
105 118Right-handed alpha
Helix 5
AA5
A
129 142Right-handed alpha
Helix 6
AA6
A
167 179Right-handed alpha
Helix 7
AA7
A
190 234Right-handed alpha
Helix 8
AA8
A
235 244Right-handed alpha
Helix 9
AA9
A
247 272Right-handed alpha
Helix 10
AB1
A
273 293Right-handed alpha
Helix 11
AB2
A
302 332Right-handed alpha
Helix 12
AB3
B
41 49Right-handed alpha
Helix 13
AB4
B
77 81Right-handed 310
Helix 14
AB5
B
95 100Right-handed alpha
Helix 15
AB6
B
101 108Right-handed alpha
Helix 16
AB7
B
110 125Right-handed alpha
Helix 17
AB8
B
141 151Right-handed alpha
Helix 18
AB9
B
169 186Right-handed alpha
Helix 19
AC1
B
196 201Right-handed alpha
Helix 20
AC2
C
36 54Right-handed alpha
Helix 21
AC3
C
60 75Right-handed alpha
Helix 22
AC4
C
76 86Right-handed alpha
Helix 23
AC5
C
105 119Right-handed alpha
Helix 24
AC6
C
129 140Right-handed alpha
Helix 25
AC7
C
167 180Right-handed alpha
Helix 26
AC8
C
190 195Right-handed alpha
Helix 27
AC9
C
197 233Right-handed alpha
Helix 28
AD1
C
236 244Right-handed alpha
Helix 29
AD2
C
247 292Right-handed alpha
Helix 30
AD3
C
302 313Right-handed alpha
Helix 31
AD4
C
319 332Right-handed alpha
Helix 32
AD5
D
36 39Right-handed 310
Helix 33
AD6
D
40 49Right-handed alpha
Helix 34
AD7
D
73 79Right-handed alpha
Helix 35
AD8
D
95 100Right-handed alpha
Helix 36
AD9
D
101 108Right-handed alpha
Helix 37
AE1
D
110 126Right-handed alpha
Helix 38
AE2
D
141 151Right-handed alpha
Helix 39
AE3
D
169 186Right-handed alpha
Helix 40
AE4
D
197 201Right-handed 310
Helix 41
AE5
E
53 98Right-handed alpha
Helix 42
AE6
E
99 116Right-handed alpha
Helix 43
AE7
E
121 126Right-handed alpha
Helix 44
AE8
E
135 186Right-handed alpha
Helix 45
AE9
E
187 200Right-handed alpha
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There are 8 sheets in PDB entry 8I6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
158 163anti-parallel
Strand 3
A
122 128anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 21first strand
Strand 2
B
3 9anti-parallel
Strand 3
B
56 60anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 83first strand
Strand 2
B
158 160parallel
Strand 3
B
189 191parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 211first strand
Strand 2
B
214 218anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
125 128first strand
Strand 2
C
158 161anti-parallel
Strand 3
C
96 100anti-parallel
Strand 4
C
184 188anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 8first strand
Strand 2
D
56 60anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
31 33first strand
Strand 2
D
206 208parallel
Strand 3
D
218 220anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
81 84first strand
Strand 2
D
158 162parallel
Strand 3
D
189 193parallel
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