Analysis of interatomic Contacts of Structural Units in PDB entry:
8I6P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I6P entry

There are 4 chains in PDB entry 8I6P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	THR 80	ILE 767
C	THR 80	ILE 767
D	THR 80	ILE 767
A	THR 80	ILE 767

There are136 helices in PDB entry 8I6P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	80	93	Right-handed alpha
Helix 2	AA2	B	103	112	Right-handed alpha
Helix 3	AA3	B	124	133	Right-handed alpha
Helix 4	AA4	B	147	165	Right-handed alpha
Helix 5	AA5	B	168	183	Right-handed alpha
Helix 6	AA6	B	184	189	Right-handed 310
Helix 7	AA7	B	197	213	Right-handed alpha
Helix 8	AA8	B	220	237	Right-handed alpha
Helix 9	AA9	B	239	245	Right-handed alpha
Helix 10	AB1	B	247	252	Right-handed 310
Helix 11	AB2	B	277	286	Right-handed alpha
Helix 12	AB3	B	290	303	Right-handed alpha
Helix 13	AB4	B	314	329	Right-handed alpha
Helix 14	AB5	B	335	349	Right-handed alpha
Helix 15	AB6	B	365	378	Right-handed alpha
Helix 16	AB7	B	384	390	Right-handed 310
Helix 17	AB8	B	408	419	Right-handed alpha
Helix 18	AB9	B	428	446	Right-handed alpha
Helix 19	AC1	B	459	470	Right-handed alpha
Helix 20	AC2	B	471	475	Right-handed 310
Helix 21	AC3	B	476	485	Right-handed alpha
Helix 22	AC4	B	509	540	Right-handed alpha
Helix 23	AC5	B	541	546	Right-handed 310
Helix 24	AC6	B	549	565	Right-handed alpha
Helix 25	AC7	B	567	569	Right-handed 310
Helix 26	AC8	B	570	595	Right-handed alpha
Helix 27	AC9	B	596	600	Right-handed 310
Helix 28	AD1	B	603	611	Right-handed 310
Helix 29	AD2	B	617	635	Right-handed alpha
Helix 30	AD3	B	643	659	Right-handed alpha
Helix 31	AD4	B	666	696	Right-handed alpha
Helix 32	AD5	B	699	722	Right-handed alpha
Helix 33	AD6	B	730	747	Right-handed alpha
Helix 34	AD7	B	750	763	Right-handed alpha
Helix 35	AD8	C	81	93	Right-handed alpha
Helix 36	AD9	C	103	112	Right-handed alpha
Helix 37	AE1	C	124	133	Right-handed alpha
Helix 38	AE2	C	147	165	Right-handed alpha
Helix 39	AE3	C	168	183	Right-handed alpha
Helix 40	AE4	C	184	189	Right-handed 310
Helix 41	AE5	C	197	213	Right-handed alpha
Helix 42	AE6	C	220	237	Right-handed alpha
Helix 43	AE7	C	239	245	Right-handed alpha
Helix 44	AE8	C	247	252	Right-handed 310
Helix 45	AE9	C	277	286	Right-handed alpha
Helix 46	AF1	C	290	303	Right-handed alpha
Helix 47	AF2	C	314	329	Right-handed alpha
Helix 48	AF3	C	335	349	Right-handed alpha
Helix 49	AF4	C	365	378	Right-handed alpha
Helix 50	AF5	C	384	390	Right-handed 310
Helix 51	AF6	C	408	419	Right-handed alpha
Helix 52	AF7	C	428	446	Right-handed alpha
Helix 53	AF8	C	459	470	Right-handed alpha
Helix 54	AF9	C	471	475	Right-handed 310
Helix 55	AG1	C	476	485	Right-handed alpha
Helix 56	AG2	C	509	540	Right-handed alpha
Helix 57	AG3	C	541	546	Right-handed 310
Helix 58	AG4	C	549	565	Right-handed alpha
Helix 59	AG5	C	567	569	Right-handed 310
Helix 60	AG6	C	570	595	Right-handed alpha
Helix 61	AG7	C	596	600	Right-handed 310
Helix 62	AG8	C	603	611	Right-handed 310
Helix 63	AG9	C	617	635	Right-handed alpha
Helix 64	AH1	C	643	659	Right-handed alpha
Helix 65	AH2	C	666	696	Right-handed alpha
Helix 66	AH3	C	699	722	Right-handed alpha
Helix 67	AH4	C	730	747	Right-handed alpha
Helix 68	AH5	C	750	763	Right-handed alpha
Helix 69	AH6	D	81	93	Right-handed alpha
Helix 70	AH7	D	103	112	Right-handed alpha
Helix 71	AH8	D	124	133	Right-handed alpha
Helix 72	AH9	D	147	165	Right-handed alpha
Helix 73	AI1	D	168	183	Right-handed alpha
Helix 74	AI2	D	184	189	Right-handed 310
Helix 75	AI3	D	197	213	Right-handed alpha
Helix 76	AI4	D	220	237	Right-handed alpha
Helix 77	AI5	D	239	245	Right-handed alpha
Helix 78	AI6	D	247	252	Right-handed 310
Helix 79	AI7	D	277	286	Right-handed alpha
Helix 80	AI8	D	290	303	Right-handed alpha
Helix 81	AI9	D	314	329	Right-handed alpha
Helix 82	AJ1	D	335	349	Right-handed alpha
Helix 83	AJ2	D	365	378	Right-handed alpha
Helix 84	AJ3	D	384	390	Right-handed 310
Helix 85	AJ4	D	408	419	Right-handed alpha
Helix 86	AJ5	D	428	446	Right-handed alpha
Helix 87	AJ6	D	459	470	Right-handed alpha
Helix 88	AJ7	D	471	475	Right-handed 310
Helix 89	AJ8	D	476	485	Right-handed alpha
Helix 90	AJ9	D	509	540	Right-handed alpha
Helix 91	AK1	D	541	546	Right-handed 310
Helix 92	AK2	D	549	565	Right-handed alpha
Helix 93	AK3	D	567	569	Right-handed 310
Helix 94	AK4	D	570	595	Right-handed alpha
Helix 95	AK5	D	596	600	Right-handed 310
Helix 96	AK6	D	603	611	Right-handed 310
Helix 97	AK7	D	617	635	Right-handed alpha
Helix 98	AK8	D	643	659	Right-handed alpha
Helix 99	AK9	D	666	696	Right-handed alpha
Helix 100	AL1	D	699	722	Right-handed alpha
Helix 101	AL2	D	730	747	Right-handed alpha
Helix 102	AL3	D	750	763	Right-handed alpha
Helix 103	AL4	A	81	93	Right-handed alpha
Helix 104	AL5	A	103	112	Right-handed alpha
Helix 105	AL6	A	124	133	Right-handed alpha
Helix 106	AL7	A	147	165	Right-handed alpha
Helix 107	AL8	A	168	183	Right-handed alpha
Helix 108	AL9	A	184	189	Right-handed 310
Helix 109	AM1	A	197	213	Right-handed alpha
Helix 110	AM2	A	220	237	Right-handed alpha
Helix 111	AM3	A	239	245	Right-handed alpha
Helix 112	AM4	A	247	252	Right-handed 310
Helix 113	AM5	A	277	286	Right-handed alpha
Helix 114	AM6	A	290	303	Right-handed alpha
Helix 115	AM7	A	314	329	Right-handed alpha
Helix 116	AM8	A	335	349	Right-handed alpha
Helix 117	AM9	A	365	378	Right-handed alpha
Helix 118	AN1	A	384	390	Right-handed 310
Helix 119	AN2	A	408	419	Right-handed alpha
Helix 120	AN3	A	428	446	Right-handed alpha
Helix 121	AN4	A	459	470	Right-handed alpha
Helix 122	AN5	A	471	475	Right-handed 310
Helix 123	AN6	A	476	485	Right-handed alpha
Helix 124	AN7	A	509	540	Right-handed alpha
Helix 125	AN8	A	541	546	Right-handed 310
Helix 126	AN9	A	549	565	Right-handed alpha
Helix 127	AO1	A	567	569	Right-handed 310
Helix 128	AO2	A	570	595	Right-handed alpha
Helix 129	AO3	A	596	600	Right-handed 310
Helix 130	AO4	A	603	611	Right-handed 310
Helix 131	AO5	A	617	635	Right-handed alpha
Helix 132	AO6	A	643	659	Right-handed alpha
Helix 133	AO7	A	666	696	Right-handed alpha
Helix 134	AO8	A	699	722	Right-handed alpha
Helix 135	AO9	A	730	747	Right-handed alpha
Helix 136	AP1	A	750	763	Right-handed alpha

There are 8 sheets in PDB entry 8I6P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	392	393	first strand
Strand 2	B	396	397	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	455	456	first strand
Strand 2	B	494	495	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	392	393	first strand
Strand 2	C	396	397	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	455	456	first strand
Strand 2	C	494	495	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	392	393	first strand
Strand 2	D	396	397	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	455	456	first strand
Strand 2	D	494	495	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	392	393	first strand
Strand 2	A	396	397	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	455	456	first strand
Strand 2	A	494	495	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I6P

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I6P