Analysis of interatomic Contacts of Structural Units in PDB entry:
8I6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I6Q entry

There are 4 chains in PDB entry 8I6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35ALA 333
B
 MET 1GLU 222
C
 SER 33LEU 332
D
 MET 1GLU 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8I6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 54Right-handed alpha
Helix 2
AA2
A
55 78Right-handed alpha
Helix 3
AA3
A
190 194Right-handed 310
Helix 4
AA4
A
195 196Right-handed 310
Helix 5
AA5
A
197 206Right-handed alpha
Helix 6
AA6
A
208 233Right-handed alpha
Helix 7
AA7
A
234 245Right-handed alpha
Helix 8
AA8
A
247 283Right-handed alpha
Helix 9
AA9
A
303 333Right-handed alpha
Helix 10
AB1
B
40 49Right-handed alpha
Helix 11
AB2
B
72 79Right-handed alpha
Helix 12
AB3
B
95 101Right-handed alpha
Helix 13
AB4
B
101 108Right-handed alpha
Helix 14
AB5
B
110 125Right-handed alpha
Helix 15
AB6
B
139 153Right-handed alpha
Helix 16
AB7
B
169 186Right-handed alpha
Helix 17
AB8
B
197 203Right-handed alpha
Helix 18
AB9
C
34 54Right-handed alpha
Helix 19
AC1
C
57 87Right-handed alpha
Helix 20
AC2
C
193 200Right-handed alpha
Helix 21
AC3
C
202 233Right-handed alpha
Helix 22
AC4
C
234 245Right-handed alpha
Helix 23
AC5
C
247 283Right-handed alpha
Helix 24
AC6
C
302 309Right-handed alpha
Helix 25
AC7
C
310 330Right-handed alpha
Helix 26
AC8
D
40 49Right-handed alpha
Helix 27
AC9
D
72 81Right-handed alpha
Helix 28
AD1
D
95 108Right-handed alpha
Helix 29
AD2
D
110 125Right-handed alpha
Helix 30
AD3
D
134 138Right-handed 310
Helix 31
AD4
D
139 153Right-handed alpha
Helix 32
AD5
D
169 186Right-handed alpha
Helix 33
AD6
D
197 203Right-handed alpha
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There are 3 sheets in PDB entry 8I6Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
2 8anti-parallel
Strand 3
B
56 61anti-parallel
Strand 4
B
64 65anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
189 194parallel
Strand 3
B
30 34parallel
Strand 4
B
207 208parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 11first strand
Strand 2
D
15 18anti-parallel
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