Analysis of interatomic Contacts of Structural Units in PDB entry:
8I6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I6Y entry

There are 2 chains in PDB entry 8I6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 16ILE 859
B
 THR 16ILE 859
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 8I6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 34Right-handed alpha
Helix 2
AA2
A
39 44Right-handed 310
Helix 3
AA3
A
45 50Right-handed 310
Helix 4
AA4
A
86 91Right-handed alpha
Helix 5
AA5
A
149 153Right-handed 310
Helix 6
AA6
A
174 187Right-handed alpha
Helix 7
AA7
A
259 263Right-handed 310
Helix 8
AA8
A
268 271Right-handed 310
Helix 9
AA9
A
272 283Right-handed alpha
Helix 10
AB1
A
283 295Right-handed alpha
Helix 11
AB2
A
301 306Right-handed alpha
Helix 12
AB3
A
317 328Right-handed alpha
Helix 13
AB4
A
329 337Right-handed alpha
Helix 14
AB5
A
362 373Right-handed alpha
Helix 15
AB6
A
392 397Right-handed alpha
Helix 16
AB7
A
404 410Right-handed alpha
Helix 17
AB8
A
411 413Right-handed 310
Helix 18
AB9
A
416 423Right-handed alpha
Helix 19
AC1
A
431 443Right-handed alpha
Helix 20
AC2
A
478 481Right-handed 310
Helix 21
AC3
A
493 517Right-handed alpha
Helix 22
AC4
A
523 538Right-handed alpha
Helix 23
AC5
A
542 549Right-handed alpha
Helix 24
AC6
A
554 566Right-handed alpha
Helix 25
AC7
A
571 577Right-handed alpha
Helix 26
AC8
A
579 581Right-handed 310
Helix 27
AC9
A
582 595Right-handed alpha
Helix 28
AD1
A
597 600Right-handed 310
Helix 29
AD2
A
601 610Right-handed alpha
Helix 30
AD3
A
629 654Right-handed alpha
Helix 31
AD4
A
657 662Right-handed alpha
Helix 32
AD5
A
663 676Right-handed alpha
Helix 33
AD6
A
678 682Right-handed 310
Helix 34
AD7
A
692 708Right-handed alpha
Helix 35
AD8
A
708 716Right-handed alpha
Helix 36
AD9
A
717 723Right-handed alpha
Helix 37
AE1
A
724 728Right-handed 310
Helix 38
AE2
A
741 750Right-handed alpha
Helix 39
AE3
A
750 759Right-handed alpha
Helix 40
AE4
A
761 777Right-handed alpha
Helix 41
AE5
A
796 822Right-handed alpha
Helix 42
AE6
A
826 830Right-handed 310
Helix 43
AE7
B
29 34Right-handed alpha
Helix 44
AE8
B
39 44Right-handed 310
Helix 45
AE9
B
45 50Right-handed 310
Helix 46
AF1
B
86 91Right-handed alpha
Helix 47
AF2
B
149 153Right-handed 310
Helix 48
AF3
B
171 187Right-handed alpha
Helix 49
AF4
B
259 263Right-handed 310
Helix 50
AF5
B
268 271Right-handed 310
Helix 51
AF6
B
272 283Right-handed alpha
Helix 52
AF7
B
283 295Right-handed alpha
Helix 53
AF8
B
301 306Right-handed alpha
Helix 54
AF9
B
317 328Right-handed alpha
Helix 55
AG1
B
329 337Right-handed alpha
Helix 56
AG2
B
362 373Right-handed alpha
Helix 57
AG3
B
392 397Right-handed alpha
Helix 58
AG4
B
404 410Right-handed alpha
Helix 59
AG5
B
416 422Right-handed alpha
Helix 60
AG6
B
431 443Right-handed alpha
Helix 61
AG7
B
478 481Right-handed 310
Helix 62
AG8
B
493 517Right-handed alpha
Helix 63
AG9
B
523 538Right-handed alpha
Helix 64
AH1
B
542 549Right-handed alpha
Helix 65
AH2
B
554 566Right-handed alpha
Helix 66
AH3
B
571 577Right-handed alpha
Helix 67
AH4
B
579 581Right-handed 310
Helix 68
AH5
B
582 595Right-handed alpha
Helix 69
AH6
B
597 600Right-handed 310
Helix 70
AH7
B
601 610Right-handed alpha
Helix 71
AH8
B
629 654Right-handed alpha
Helix 72
AH9
B
657 662Right-handed alpha
Helix 73
AI1
B
663 676Right-handed alpha
Helix 74
AI2
B
678 682Right-handed 310
Helix 75
AI3
B
692 708Right-handed alpha
Helix 76
AI4
B
708 716Right-handed alpha
Helix 77
AI5
B
717 723Right-handed alpha
Helix 78
AI6
B
724 728Right-handed 310
Helix 79
AI7
B
741 750Right-handed alpha
Helix 80
AI8
B
750 759Right-handed alpha
Helix 81
AI9
B
761 777Right-handed alpha
Helix 82
AJ1
B
796 822Right-handed alpha
Helix 83
AJ2
B
826 830Right-handed 310
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There are 10 sheets in PDB entry 8I6Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
95 103anti-parallel
Strand 3
A
19 28anti-parallel
Strand 4
A
123 133anti-parallel
Strand 5
A
137 147anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
A
54 59anti-parallel
Strand 3
A
112 117anti-parallel
Strand 4
A
157 160anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
230 231anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 381first strand
Strand 2
A
426 430anti-parallel
Strand 3
A
451 458anti-parallel
Strand 4
A
464 474anti-parallel
Strand 5
A
483 488anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
612 613first strand
Strand 2
A
623 624anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
B
95 103anti-parallel
Strand 3
B
19 28anti-parallel
Strand 4
B
123 133anti-parallel
Strand 5
B
137 147anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 79first strand
Strand 2
B
54 59anti-parallel
Strand 3
B
112 117anti-parallel
Strand 4
B
157 160anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 203first strand
Strand 2
B
230 231anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
380 381first strand
Strand 2
B
426 430anti-parallel
Strand 3
B
451 458anti-parallel
Strand 4
B
464 474anti-parallel
Strand 5
B
483 488anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
612 613first strand
Strand 2
B
623 624anti-parallel
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