Analysis of interatomic Contacts of Structural Units in PDB entry:
8I7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8I7W entry

There are 5 chains in PDB entry 8I7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 9PRO 299
B
 LEU 5PHE 354
C
 SER 2ASN 340
D
 THR 6GLU 63
E
 ASP 1LEU 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8I7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 54Right-handed alpha
Helix 2
AA2
A
60 89Right-handed alpha
Helix 3
AA3
A
97 130Right-handed alpha
Helix 4
AA4
A
134 138Right-handed 310
Helix 5
AA5
A
140 166Right-handed alpha
Helix 6
AA6
A
187 218Right-handed alpha
Helix 7
AA7
A
223 260Right-handed alpha
Helix 8
AA8
A
266 294Right-handed alpha
Helix 9
AA9
B
6 32Right-handed alpha
Helix 10
AB1
B
45 55Right-handed alpha
Helix 11
AB2
B
209 217Right-handed 310
Helix 12
AB3
B
246 255Right-handed alpha
Helix 13
AB4
B
327 351Right-handed alpha
Helix 14
AB5
C
3 25Right-handed alpha
Helix 15
AB6
C
29 35Right-handed alpha
Helix 16
AB7
D
7 22Right-handed alpha
Helix 17
AB8
D
29 44Right-handed alpha
Helix 18
AB9
E
53 56Right-handed 310
Helix 19
AC1
E
87 91Right-handed 310
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There are 14 sheets in PDB entry 8I7W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
17 19anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
174 176anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 190first strand
Strand 2
B
195 200anti-parallel
Strand 3
B
33 40parallel
Strand 4
B
220 225parallel
Strand 5
B
263 268parallel
Strand 6
B
319 323parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 51first strand
Strand 2
C
336 340anti-parallel
Strand 3
C
327 331anti-parallel
Strand 4
C
315 320anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 63first strand
Strand 2
C
69 72anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
91 94anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 103first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
121 125anti-parallel
Strand 4
C
134 137anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
150 151first strand
Strand 2
C
156 158anti-parallel
Strand 3
C
166 170anti-parallel
Strand 4
C
176 180anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
198 202first strand
Strand 2
C
208 212anti-parallel
Strand 3
C
218 222anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 234first strand
Strand 2
C
240 245anti-parallel
Strand 3
C
249 254anti-parallel
Strand 4
C
259 265anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 277first strand
Strand 2
C
286 289anti-parallel
Strand 3
C
294 296anti-parallel
Strand 4
C
306 308anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 5first strand
Strand 2
E
19 24anti-parallel
Strand 3
E
78 83anti-parallel
Strand 4
E
68 73anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 60first strand
Strand 2
E
45 51anti-parallel
Strand 3
E
33 39anti-parallel
Strand 4
E
92 99anti-parallel
Strand 5
E
115 117anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
140 141first strand
Strand 2
E
155 161anti-parallel
Strand 3
E
211 216anti-parallel
Strand 4
E
203 208anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
146 148first strand
Strand 2
E
243 246parallel
Strand 3
E
225 231anti-parallel
Strand 4
E
174 179anti-parallel
Strand 5
E
186 189anti-parallel
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