Analysis of interatomic Contacts of Structural Units in PDB entry:
8I92

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I92 entry

There are 4 chains in PDB entry 8I92 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 20	ARG 768
B	VAL 5	HIS 609
C	THR 20	ARG 768
D	VAL 5	HIS 609

There are140 helices in PDB entry 8I92. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	53	Right-handed alpha
Helix 2	AA2	A	55	80	Right-handed alpha
Helix 3	AA3	A	90	101	Right-handed alpha
Helix 4	AA4	A	103	108	Right-handed 310
Helix 5	AA5	A	110	130	Right-handed alpha
Helix 6	AA6	A	147	155	Right-handed alpha
Helix 7	AA7	A	157	193	Right-handed alpha
Helix 8	AA8	A	198	204	Right-handed alpha
Helix 9	AA9	A	205	208	Right-handed 310
Helix 10	AB1	A	220	230	Right-handed alpha
Helix 11	AB2	A	233	249	Right-handed alpha
Helix 12	AB3	A	265	267	Right-handed 310
Helix 13	AB4	A	275	277	Right-handed 310
Helix 14	AB5	A	278	283	Right-handed alpha
Helix 15	AB6	A	293	299	Right-handed alpha
Helix 16	AB7	A	305	319	Right-handed alpha
Helix 17	AB8	A	324	330	Right-handed alpha
Helix 18	AB9	A	366	383	Right-handed alpha
Helix 19	AC1	A	389	393	Right-handed 310
Helix 20	AC2	A	401	411	Right-handed alpha
Helix 21	AC3	A	414	422	Right-handed alpha
Helix 22	AC4	A	433	444	Right-handed alpha
Helix 23	AC5	A	446	448	Right-handed 310
Helix 24	AC6	A	449	464	Right-handed alpha
Helix 25	AC7	A	472	484	Right-handed alpha
Helix 26	AC8	A	499	503	Right-handed 310
Helix 27	AC9	A	505	509	Right-handed 310
Helix 28	AD1	A	513	534	Right-handed alpha
Helix 29	AD2	A	538	542	Right-handed 310
Helix 30	AD3	A	548	559	Right-handed alpha
Helix 31	AD4	A	565	572	Right-handed alpha
Helix 32	AD5	A	581	588	Right-handed alpha
Helix 33	AD6	A	588	599	Right-handed alpha
Helix 34	AD7	A	623	628	Right-handed alpha
Helix 35	AD8	A	636	655	Right-handed alpha
Helix 36	AD9	A	696	716	Right-handed alpha
Helix 37	AE1	A	740	767	Right-handed alpha
Helix 38	AE2	B	20	25	Right-handed alpha
Helix 39	AE3	B	27	31	Right-handed 310
Helix 40	AE4	B	37	49	Right-handed alpha
Helix 41	AE5	B	56	64	Right-handed alpha
Helix 42	AE6	B	71	81	Right-handed alpha
Helix 43	AE7	B	82	96	Right-handed alpha
Helix 44	AE8	B	101	106	Right-handed alpha
Helix 45	AE9	B	108	110	Right-handed 310
Helix 46	AF1	B	111	142	Right-handed alpha
Helix 47	AF2	B	163	168	Right-handed alpha
Helix 48	AF3	B	170	178	Right-handed alpha
Helix 49	AF4	B	194	212	Right-handed alpha
Helix 50	AF5	B	218	227	Right-handed alpha
Helix 51	AF6	B	229	242	Right-handed alpha
Helix 52	AF7	B	251	256	Right-handed 310
Helix 53	AF8	B	264	279	Right-handed alpha
Helix 54	AF9	B	285	290	Right-handed alpha
Helix 55	AG1	B	291	293	Right-handed 310
Helix 56	AG2	B	299	349	Right-handed alpha
Helix 57	AG3	B	359	371	Right-handed alpha
Helix 58	AG4	B	371	377	Right-handed alpha
Helix 59	AG5	B	402	408	Right-handed alpha
Helix 60	AG6	B	412	446	Right-handed alpha
Helix 61	AG7	B	454	470	Right-handed alpha
Helix 62	AG8	B	471	475	Right-handed 310
Helix 63	AG9	B	477	490	Right-handed alpha
Helix 64	AH1	B	492	508	Right-handed alpha
Helix 65	AH2	B	510	523	Right-handed alpha
Helix 66	AH3	B	527	536	Right-handed alpha
Helix 67	AH4	B	536	554	Right-handed alpha
Helix 68	AH5	B	579	581	Right-handed 310
Helix 69	AH6	B	582	591	Right-handed alpha
Helix 70	AH7	B	591	608	Right-handed alpha
Helix 71	AH8	C	21	53	Right-handed alpha
Helix 72	AH9	C	55	80	Right-handed alpha
Helix 73	AI1	C	90	101	Right-handed alpha
Helix 74	AI2	C	103	108	Right-handed 310
Helix 75	AI3	C	110	130	Right-handed alpha
Helix 76	AI4	C	147	155	Right-handed alpha
Helix 77	AI5	C	157	193	Right-handed alpha
Helix 78	AI6	C	198	204	Right-handed alpha
Helix 79	AI7	C	205	208	Right-handed 310
Helix 80	AI8	C	220	230	Right-handed alpha
Helix 81	AI9	C	233	249	Right-handed alpha
Helix 82	AJ1	C	265	267	Right-handed 310
Helix 83	AJ2	C	275	277	Right-handed 310
Helix 84	AJ3	C	278	283	Right-handed alpha
Helix 85	AJ4	C	293	299	Right-handed alpha
Helix 86	AJ5	C	305	319	Right-handed alpha
Helix 87	AJ6	C	324	330	Right-handed alpha
Helix 88	AJ7	C	366	383	Right-handed alpha
Helix 89	AJ8	C	389	393	Right-handed 310
Helix 90	AJ9	C	401	411	Right-handed alpha
Helix 91	AK1	C	414	422	Right-handed alpha
Helix 92	AK2	C	433	444	Right-handed alpha
Helix 93	AK3	C	446	448	Right-handed 310
Helix 94	AK4	C	449	464	Right-handed alpha
Helix 95	AK5	C	472	484	Right-handed alpha
Helix 96	AK6	C	499	503	Right-handed 310
Helix 97	AK7	C	505	509	Right-handed 310
Helix 98	AK8	C	513	534	Right-handed alpha
Helix 99	AK9	C	538	542	Right-handed 310
Helix 100	AL1	C	548	559	Right-handed alpha
Helix 101	AL2	C	565	572	Right-handed alpha
Helix 102	AL3	C	581	588	Right-handed alpha
Helix 103	AL4	C	588	599	Right-handed alpha
Helix 104	AL5	C	623	628	Right-handed alpha
Helix 105	AL6	C	636	655	Right-handed alpha
Helix 106	AL7	C	696	716	Right-handed alpha
Helix 107	AL8	C	740	767	Right-handed alpha
Helix 108	AL9	D	20	25	Right-handed alpha
Helix 109	AM1	D	27	31	Right-handed 310
Helix 110	AM2	D	37	49	Right-handed alpha
Helix 111	AM3	D	56	64	Right-handed alpha
Helix 112	AM4	D	71	81	Right-handed alpha
Helix 113	AM5	D	82	96	Right-handed alpha
Helix 114	AM6	D	101	106	Right-handed alpha
Helix 115	AM7	D	108	110	Right-handed 310
Helix 116	AM8	D	111	142	Right-handed alpha
Helix 117	AM9	D	163	168	Right-handed alpha
Helix 118	AN1	D	170	178	Right-handed alpha
Helix 119	AN2	D	194	212	Right-handed alpha
Helix 120	AN3	D	218	227	Right-handed alpha
Helix 121	AN4	D	229	242	Right-handed alpha
Helix 122	AN5	D	251	256	Right-handed 310
Helix 123	AN6	D	264	279	Right-handed alpha
Helix 124	AN7	D	285	290	Right-handed alpha
Helix 125	AN8	D	291	293	Right-handed 310
Helix 126	AN9	D	299	349	Right-handed alpha
Helix 127	AO1	D	359	371	Right-handed alpha
Helix 128	AO2	D	371	377	Right-handed alpha
Helix 129	AO3	D	402	408	Right-handed alpha
Helix 130	AO4	D	412	446	Right-handed alpha
Helix 131	AO5	D	454	470	Right-handed alpha
Helix 132	AO6	D	471	475	Right-handed 310
Helix 133	AO7	D	477	490	Right-handed alpha
Helix 134	AO8	D	492	508	Right-handed alpha
Helix 135	AO9	D	510	523	Right-handed alpha
Helix 136	AP1	D	527	536	Right-handed alpha
Helix 137	AP2	D	536	554	Right-handed alpha
Helix 138	AP3	D	579	581	Right-handed 310
Helix 139	AP4	D	582	591	Right-handed alpha
Helix 140	AP5	D	591	608	Right-handed alpha

There are 12 sheets in PDB entry 8I92. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	133	first strand
Strand 2	A	141	142	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	263	first strand
Strand 2	A	487	488	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	352	first strand
Strand 2	A	355	359	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	670	673	first strand
Strand 2	A	680	687	anti-parallel
Strand 3	A	690	694	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	670	673	first strand
Strand 2	A	680	687	anti-parallel
Strand 3	A	618	622	anti-parallel
Strand 4	A	722	723	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	559	562	first strand
Strand 2	B	574	577	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	133	first strand
Strand 2	C	141	142	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	263	first strand
Strand 2	C	487	488	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	352	first strand
Strand 2	C	355	359	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	670	673	first strand
Strand 2	C	680	687	anti-parallel
Strand 3	C	690	694	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	670	673	first strand
Strand 2	C	680	687	anti-parallel
Strand 3	C	618	622	anti-parallel
Strand 4	C	722	723	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	559	562	first strand
Strand 2	D	574	577	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I92

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I92