Analysis of interatomic Contacts of Structural Units in PDB entry:
8I93

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I93 entry

There are 4 chains in PDB entry 8I93 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 20	ARG 768
B	VAL 5	HIS 609
C	THR 20	ARG 768
D	VAL 5	HIS 609

There are130 helices in PDB entry 8I93. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	52	Right-handed alpha
Helix 2	AA2	A	55	81	Right-handed alpha
Helix 3	AA3	A	90	101	Right-handed alpha
Helix 4	AA4	A	109	130	Right-handed alpha
Helix 5	AA5	A	147	155	Right-handed alpha
Helix 6	AA6	A	157	172	Right-handed alpha
Helix 7	AA7	A	176	193	Right-handed alpha
Helix 8	AA8	A	198	204	Right-handed alpha
Helix 9	AA9	A	205	207	Right-handed 310
Helix 10	AB1	A	220	230	Right-handed alpha
Helix 11	AB2	A	233	249	Right-handed alpha
Helix 12	AB3	A	275	277	Right-handed 310
Helix 13	AB4	A	278	283	Right-handed alpha
Helix 14	AB5	A	293	300	Right-handed alpha
Helix 15	AB6	A	305	319	Right-handed alpha
Helix 16	AB7	A	324	331	Right-handed alpha
Helix 17	AB8	A	366	383	Right-handed alpha
Helix 18	AB9	A	389	393	Right-handed 310
Helix 19	AC1	A	401	412	Right-handed alpha
Helix 20	AC2	A	414	422	Right-handed alpha
Helix 21	AC3	A	433	444	Right-handed alpha
Helix 22	AC4	A	449	464	Right-handed alpha
Helix 23	AC5	A	472	484	Right-handed alpha
Helix 24	AC6	A	499	502	Right-handed 310
Helix 25	AC7	A	503	508	Right-handed alpha
Helix 26	AC8	A	513	531	Right-handed alpha
Helix 27	AC9	A	538	542	Right-handed 310
Helix 28	AD1	A	548	559	Right-handed alpha
Helix 29	AD2	A	565	572	Right-handed alpha
Helix 30	AD3	A	581	588	Right-handed alpha
Helix 31	AD4	A	588	599	Right-handed alpha
Helix 32	AD5	A	623	628	Right-handed alpha
Helix 33	AD6	A	636	658	Right-handed alpha
Helix 34	AD7	A	666	668	Right-handed 310
Helix 35	AD8	A	696	715	Right-handed alpha
Helix 36	AD9	A	741	767	Right-handed alpha
Helix 37	AE1	B	20	25	Right-handed alpha
Helix 38	AE2	B	26	30	Right-handed 310
Helix 39	AE3	B	37	49	Right-handed alpha
Helix 40	AE4	B	57	64	Right-handed alpha
Helix 41	AE5	B	71	96	Right-handed alpha
Helix 42	AE6	B	108	112	Right-handed 310
Helix 43	AE7	B	113	129	Right-handed alpha
Helix 44	AE8	B	130	142	Right-handed alpha
Helix 45	AE9	B	148	152	Right-handed 310
Helix 46	AF1	B	163	168	Right-handed alpha
Helix 47	AF2	B	172	177	Right-handed alpha
Helix 48	AF3	B	194	212	Right-handed alpha
Helix 49	AF4	B	218	227	Right-handed alpha
Helix 50	AF5	B	229	243	Right-handed alpha
Helix 51	AF6	B	264	279	Right-handed alpha
Helix 52	AF7	B	285	290	Right-handed alpha
Helix 53	AF8	B	298	314	Right-handed alpha
Helix 54	AF9	B	314	349	Right-handed alpha
Helix 55	AG1	B	351	355	Right-handed 310
Helix 56	AG2	B	359	369	Right-handed alpha
Helix 57	AG3	B	371	376	Right-handed alpha
Helix 58	AG4	B	412	445	Right-handed alpha
Helix 59	AG5	B	454	470	Right-handed alpha
Helix 60	AG6	B	478	508	Right-handed alpha
Helix 61	AG7	B	510	523	Right-handed alpha
Helix 62	AG8	B	527	536	Right-handed alpha
Helix 63	AG9	B	536	551	Right-handed alpha
Helix 64	AH1	B	581	591	Right-handed alpha
Helix 65	AH2	B	591	608	Right-handed alpha
Helix 66	AH3	C	21	52	Right-handed alpha
Helix 67	AH4	C	55	81	Right-handed alpha
Helix 68	AH5	C	90	101	Right-handed alpha
Helix 69	AH6	C	109	130	Right-handed alpha
Helix 70	AH7	C	147	155	Right-handed alpha
Helix 71	AH8	C	157	172	Right-handed alpha
Helix 72	AH9	C	176	193	Right-handed alpha
Helix 73	AI1	C	198	204	Right-handed alpha
Helix 74	AI2	C	205	207	Right-handed 310
Helix 75	AI3	C	220	230	Right-handed alpha
Helix 76	AI4	C	233	249	Right-handed alpha
Helix 77	AI5	C	275	277	Right-handed 310
Helix 78	AI6	C	278	283	Right-handed alpha
Helix 79	AI7	C	293	300	Right-handed alpha
Helix 80	AI8	C	305	319	Right-handed alpha
Helix 81	AI9	C	324	331	Right-handed alpha
Helix 82	AJ1	C	366	383	Right-handed alpha
Helix 83	AJ2	C	389	393	Right-handed 310
Helix 84	AJ3	C	401	412	Right-handed alpha
Helix 85	AJ4	C	414	422	Right-handed alpha
Helix 86	AJ5	C	433	444	Right-handed alpha
Helix 87	AJ6	C	449	464	Right-handed alpha
Helix 88	AJ7	C	472	484	Right-handed alpha
Helix 89	AJ8	C	499	502	Right-handed 310
Helix 90	AJ9	C	503	508	Right-handed alpha
Helix 91	AK1	C	513	531	Right-handed alpha
Helix 92	AK2	C	538	542	Right-handed 310
Helix 93	AK3	C	548	559	Right-handed alpha
Helix 94	AK4	C	565	572	Right-handed alpha
Helix 95	AK5	C	581	588	Right-handed alpha
Helix 96	AK6	C	588	599	Right-handed alpha
Helix 97	AK7	C	623	628	Right-handed alpha
Helix 98	AK8	C	636	658	Right-handed alpha
Helix 99	AK9	C	666	668	Right-handed 310
Helix 100	AL1	C	696	715	Right-handed alpha
Helix 101	AL2	C	741	767	Right-handed alpha
Helix 102	AL3	D	20	25	Right-handed alpha
Helix 103	AL4	D	26	30	Right-handed 310
Helix 104	AL5	D	37	49	Right-handed alpha
Helix 105	AL6	D	57	64	Right-handed alpha
Helix 106	AL7	D	71	96	Right-handed alpha
Helix 107	AL8	D	108	112	Right-handed 310
Helix 108	AL9	D	113	129	Right-handed alpha
Helix 109	AM1	D	130	142	Right-handed alpha
Helix 110	AM2	D	148	152	Right-handed 310
Helix 111	AM3	D	163	168	Right-handed alpha
Helix 112	AM4	D	172	177	Right-handed alpha
Helix 113	AM5	D	194	212	Right-handed alpha
Helix 114	AM6	D	218	227	Right-handed alpha
Helix 115	AM7	D	229	243	Right-handed alpha
Helix 116	AM8	D	264	279	Right-handed alpha
Helix 117	AM9	D	285	290	Right-handed alpha
Helix 118	AN1	D	298	314	Right-handed alpha
Helix 119	AN2	D	314	349	Right-handed alpha
Helix 120	AN3	D	351	355	Right-handed 310
Helix 121	AN4	D	359	369	Right-handed alpha
Helix 122	AN5	D	371	376	Right-handed alpha
Helix 123	AN6	D	412	445	Right-handed alpha
Helix 124	AN7	D	454	470	Right-handed alpha
Helix 125	AN8	D	478	508	Right-handed alpha
Helix 126	AN9	D	510	523	Right-handed alpha
Helix 127	AO1	D	527	536	Right-handed alpha
Helix 128	AO2	D	536	551	Right-handed alpha
Helix 129	AO3	D	581	591	Right-handed alpha
Helix 130	AO4	D	591	608	Right-handed alpha

There are 10 sheets in PDB entry 8I93. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	133	first strand
Strand 2	A	141	143	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	263	first strand
Strand 2	A	487	488	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	352	first strand
Strand 2	A	355	359	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	670	673	first strand
Strand 2	A	680	685	anti-parallel
Strand 3	A	618	622	anti-parallel
Strand 4	A	722	723	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	559	562	first strand
Strand 2	B	574	577	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	133	first strand
Strand 2	C	141	143	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	263	first strand
Strand 2	C	487	488	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	352	first strand
Strand 2	C	355	359	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	670	673	first strand
Strand 2	C	680	685	anti-parallel
Strand 3	C	618	622	anti-parallel
Strand 4	C	722	723	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	559	562	first strand
Strand 2	D	574	577	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I93

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I93