Analysis of interatomic Contacts of Structural Units in PDB entry:
8I9G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8I9G entry

There are 2 chains in PDB entry 8I9G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	SER 19	ASP 615
A	CYS 336	CYS 525

There are 34 helices in PDB entry 8I9G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	22	53	Right-handed alpha
Helix 2	AA2	D	56	80	Right-handed alpha
Helix 3	AA3	D	81	83	Right-handed 310
Helix 4	AA4	D	90	102	Right-handed alpha
Helix 5	AA5	D	109	129	Right-handed alpha
Helix 6	AA6	D	147	155	Right-handed alpha
Helix 7	AA7	D	157	172	Right-handed alpha
Helix 8	AA8	D	176	193	Right-handed alpha
Helix 9	AA9	D	198	205	Right-handed alpha
Helix 10	AB1	D	206	208	Right-handed 310
Helix 11	AB2	D	220	230	Right-handed alpha
Helix 12	AB3	D	233	249	Right-handed alpha
Helix 13	AB4	D	275	279	Right-handed 310
Helix 14	AB5	D	294	300	Right-handed alpha
Helix 15	AB6	D	305	318	Right-handed alpha
Helix 16	AB7	D	326	331	Right-handed alpha
Helix 17	AB8	D	366	385	Right-handed alpha
Helix 18	AB9	D	389	393	Right-handed 310
Helix 19	AC1	D	400	412	Right-handed alpha
Helix 20	AC2	D	414	422	Right-handed alpha
Helix 21	AC3	D	431	447	Right-handed alpha
Helix 22	AC4	D	449	465	Right-handed alpha
Helix 23	AC5	D	472	484	Right-handed alpha
Helix 24	AC6	D	499	502	Right-handed 310
Helix 25	AC7	D	503	508	Right-handed alpha
Helix 26	AC8	D	513	533	Right-handed alpha
Helix 27	AC9	D	538	542	Right-handed 310
Helix 28	AD1	D	547	559	Right-handed alpha
Helix 29	AD2	D	565	570	Right-handed alpha
Helix 30	AD3	D	570	575	Right-handed alpha
Helix 31	AD4	D	581	599	Right-handed alpha
Helix 32	AD5	A	337	342	Right-handed alpha
Helix 33	AD6	A	365	370	Right-handed alpha
Helix 34	AD7	A	403	410	Right-handed 310

There are 4 sheets in PDB entry 8I9G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	352	first strand
Strand 2	D	355	359	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	402	anti-parallel
Strand 3	A	508	516	anti-parallel
Strand 4	A	432	437	anti-parallel
Strand 5	A	376	379	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8I9G

Analysis of interatomic Contacts of Structural Units in PDB entry:
8I9G