Analysis of interatomic Contacts of Structural Units in PDB entry:
8IA3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IA3 entry

There are 8 chains in PDB entry 8IA3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 236GLY 343
B
 ARG 236HIS 335
C
 G 304 G 320
D
 C 324 C 340
E
 ARG 236GLN 346
F
 ARG 236MET 339
G
 G 304 C 321
H
 G 323 C 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8IA3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
239 262Right-handed alpha
Helix 2
AA2
A
275 303Right-handed alpha
Helix 3
AA3
A
303 334Right-handed alpha
Helix 4
AA4
B
237 260Right-handed alpha
Helix 5
AA5
B
275 330Right-handed alpha
Helix 6
AA6
E
237 262Right-handed alpha
Helix 7
AA7
E
275 300Right-handed alpha
Helix 8
AA8
E
300 305Right-handed alpha
Helix 9
AA9
E
306 316Right-handed alpha
Helix 10
AB1
E
316 343Right-handed alpha
Helix 11
AB2
F
237 260Right-handed alpha
Helix 12
AB3
F
262 266Right-handed 310
Helix 13
AB4
F
275 332Right-handed alpha
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There are no sheets in PDB entry 8IA3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il