Analysis of interatomic Contacts of Structural Units in PDB entry:
8IAB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IAB entry

There are 2 chains in PDB entry 8IAB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 42ASP 767
B
 THR 42ASP 767
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 8IAB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 74Right-handed 310
Helix 2
AA2
A
75 124Right-handed alpha
Helix 3
AA3
A
127 154Right-handed alpha
Helix 4
AA4
A
155 158Right-handed 310
Helix 5
AA5
A
161 169Right-handed alpha
Helix 6
AA6
A
179 195Right-handed alpha
Helix 7
AA7
A
202 220Right-handed alpha
Helix 8
AA8
A
229 236Right-handed 310
Helix 9
AA9
A
237 258Right-handed alpha
Helix 10
AB1
A
261 270Right-handed alpha
Helix 11
AB2
A
276 301Right-handed alpha
Helix 12
AB3
A
327 329Right-handed 310
Helix 13
AB4
A
330 364Right-handed alpha
Helix 14
AB5
A
366 388Right-handed alpha
Helix 15
AB6
A
389 391Right-handed 310
Helix 16
AB7
A
427 432Right-handed alpha
Helix 17
AB8
A
434 443Right-handed alpha
Helix 18
AB9
A
452 471Right-handed alpha
Helix 19
AC1
A
479 499Right-handed alpha
Helix 20
AC2
A
505 523Right-handed alpha
Helix 21
AC3
A
525 537Right-handed alpha
Helix 22
AC4
A
538 540Right-handed 310
Helix 23
AC5
A
541 558Right-handed alpha
Helix 24
AC6
A
562 571Right-handed alpha
Helix 25
AC7
A
581 586Right-handed 310
Helix 26
AC8
A
588 593Right-handed alpha
Helix 27
AC9
A
594 596Right-handed 310
Helix 28
AD1
A
608 618Right-handed alpha
Helix 29
AD2
A
643 653Right-handed alpha
Helix 30
AD3
A
663 671Right-handed alpha
Helix 31
AD4
A
672 678Right-handed alpha
Helix 32
AD5
A
682 686Right-handed 310
Helix 33
AD6
A
700 703Right-handed 310
Helix 34
AD7
A
715 727Right-handed alpha
Helix 35
AD8
A
755 763Right-handed alpha
Helix 36
AD9
A
764 767Right-handed 310
Helix 37
AE1
B
70 74Right-handed 310
Helix 38
AE2
B
75 124Right-handed alpha
Helix 39
AE3
B
127 154Right-handed alpha
Helix 40
AE4
B
155 158Right-handed 310
Helix 41
AE5
B
161 169Right-handed alpha
Helix 42
AE6
B
179 195Right-handed alpha
Helix 43
AE7
B
202 220Right-handed alpha
Helix 44
AE8
B
229 236Right-handed 310
Helix 45
AE9
B
237 258Right-handed alpha
Helix 46
AF1
B
261 270Right-handed alpha
Helix 47
AF2
B
276 301Right-handed alpha
Helix 48
AF3
B
327 329Right-handed 310
Helix 49
AF4
B
330 364Right-handed alpha
Helix 50
AF5
B
366 388Right-handed alpha
Helix 51
AF6
B
389 391Right-handed 310
Helix 52
AF7
B
427 432Right-handed alpha
Helix 53
AF8
B
434 443Right-handed alpha
Helix 54
AF9
B
452 471Right-handed alpha
Helix 55
AG1
B
479 499Right-handed alpha
Helix 56
AG2
B
505 523Right-handed alpha
Helix 57
AG3
B
525 537Right-handed alpha
Helix 58
AG4
B
538 540Right-handed 310
Helix 59
AG5
B
541 558Right-handed alpha
Helix 60
AG6
B
562 571Right-handed alpha
Helix 61
AG7
B
581 586Right-handed 310
Helix 62
AG8
B
588 593Right-handed alpha
Helix 63
AG9
B
594 596Right-handed 310
Helix 64
AH1
B
608 618Right-handed alpha
Helix 65
AH2
B
643 653Right-handed alpha
Helix 66
AH3
B
663 671Right-handed alpha
Helix 67
AH4
B
672 678Right-handed alpha
Helix 68
AH5
B
682 686Right-handed 310
Helix 69
AH6
B
700 703Right-handed 310
Helix 70
AH7
B
715 727Right-handed alpha
Helix 71
AH8
B
755 763Right-handed alpha
Helix 72
AH9
B
764 767Right-handed 310
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There are 12 sheets in PDB entry 8IAB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 47first strand
Strand 2
A
50 53anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
172 173anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 396first strand
Strand 2
A
423 425anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
602 603first strand
Strand 2
A
622 626parallel
Strand 3
A
639 642anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
605 607first strand
Strand 2
A
696 698anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
709 711first strand
Strand 2
A
731 734parallel
Strand 3
A
747 749anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 47first strand
Strand 2
B
50 53anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 56first strand
Strand 2
B
172 173anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
394 396first strand
Strand 2
B
423 425anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
602 603first strand
Strand 2
B
622 626parallel
Strand 3
B
639 642anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
605 607first strand
Strand 2
B
696 698anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
709 711first strand
Strand 2
B
731 734parallel
Strand 3
B
747 749anti-parallel
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