Analysis of interatomic Contacts of Structural Units in PDB entry:
8IAG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IAG entry

There are 2 chains in PDB entry 8IAG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3THR 224
B
 PRO 4PRO 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8IAG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 26Right-handed alpha
Helix 2
AA2
A
38 50Right-handed alpha
Helix 3
AA3
A
52 65Right-handed alpha
Helix 4
AA4
A
76 82Right-handed 310
Helix 5
AA5
A
106 116Right-handed alpha
Helix 6
AA6
A
123 142Right-handed alpha
Helix 7
AA7
A
148 167Right-handed alpha
Helix 8
AA8
A
176 186Right-handed alpha
Helix 9
AA9
A
189 193Right-handed 310
Helix 10
AB1
A
202 217Right-handed alpha
Helix 11
AB2
B
17 26Right-handed alpha
Helix 12
AB3
B
37 50Right-handed alpha
Helix 13
AB4
B
52 65Right-handed alpha
Helix 14
AB5
B
76 82Right-handed 310
Helix 15
AB6
B
106 115Right-handed alpha
Helix 16
AB7
B
124 142Right-handed alpha
Helix 17
AB8
B
148 167Right-handed alpha
Helix 18
AB9
B
176 186Right-handed alpha
Helix 19
AC1
B
189 193Right-handed 310
Helix 20
AC2
B
202 217Right-handed alpha
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There are 3 sheets in PDB entry 8IAG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
74 75anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 122first strand
Strand 2
A
174 175anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 123first strand
Strand 2
B
173 175anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il