Analysis of interatomic Contacts of Structural Units in PDB entry:
8IAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IAW entry

There are 2 chains in PDB entry 8IAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 501
B
 MET 21ARG 521
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 8IAW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 16Right-handed 310
Helix 2
AA2
A
34 48Right-handed alpha
Helix 3
AA3
A
61 80Right-handed alpha
Helix 4
AA4
A
99 103Right-handed 310
Helix 5
AA5
A
135 137Right-handed 310
Helix 6
AA6
A
139 143Right-handed 310
Helix 7
AA7
A
199 213Right-handed alpha
Helix 8
AA8
A
224 238Right-handed alpha
Helix 9
AA9
A
251 257Right-handed alpha
Helix 10
AB1
A
257 265Right-handed alpha
Helix 11
AB2
A
272 279Right-handed alpha
Helix 12
AB3
A
280 282Right-handed 310
Helix 13
AB4
A
283 298Right-handed alpha
Helix 14
AB5
A
309 314Right-handed 310
Helix 15
AB6
A
319 333Right-handed alpha
Helix 16
AB7
A
340 345Right-handed alpha
Helix 17
AB8
A
348 366Right-handed alpha
Helix 18
AB9
A
366 371Right-handed alpha
Helix 19
AC1
A
374 378Right-handed 310
Helix 20
AC2
A
382 398Right-handed alpha
Helix 21
AC3
A
410 419Right-handed alpha
Helix 22
AC4
A
431 438Right-handed alpha
Helix 23
AC5
A
454 469Right-handed alpha
Helix 24
AC6
B
32 36Right-handed 310
Helix 25
AC7
B
54 68Right-handed alpha
Helix 26
AC8
B
81 100Right-handed alpha
Helix 27
AC9
B
119 123Right-handed 310
Helix 28
AD1
B
155 157Right-handed 310
Helix 29
AD2
B
159 163Right-handed 310
Helix 30
AD3
B
219 233Right-handed alpha
Helix 31
AD4
B
244 258Right-handed alpha
Helix 32
AD5
B
271 277Right-handed alpha
Helix 33
AD6
B
277 285Right-handed alpha
Helix 34
AD7
B
292 299Right-handed alpha
Helix 35
AD8
B
300 302Right-handed 310
Helix 36
AD9
B
303 318Right-handed alpha
Helix 37
AE1
B
329 334Right-handed 310
Helix 38
AE2
B
339 353Right-handed alpha
Helix 39
AE3
B
360 365Right-handed alpha
Helix 40
AE4
B
368 386Right-handed alpha
Helix 41
AE5
B
386 391Right-handed alpha
Helix 42
AE6
B
402 418Right-handed alpha
Helix 43
AE7
B
430 439Right-handed alpha
Helix 44
AE8
B
451 458Right-handed alpha
Helix 45
AE9
B
474 489Right-handed alpha
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There are 7 sheets in PDB entry 8IAW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
52 56parallel
Strand 3
A
84 88parallel
Strand 4
A
216 219parallel
Strand 5
A
244 249parallel
Strand 6
A
267 271parallel
Strand 7
A
301 305parallel
Strand 8
A
336 339parallel
Strand 9
A
6 10parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 96first strand
Strand 2
A
128 133anti-parallel
Strand 3
A
113 117parallel
Strand 4
A
169 174anti-parallel
Strand 5
A
156 164anti-parallel
Strand 6
A
148 151anti-parallel
Strand 7
A
185 187anti-parallel
Strand 8
A
94 96anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 108first strand
Strand 2
A
178 181anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 448first strand
Strand 2
A
424 429parallel
Strand 3
A
400 406parallel
Strand 4
A
477 482parallel
Strand 5
A
494 499anti-parallel
Strand 6
B
514 519anti-parallel
Strand 7
B
497 502anti-parallel
Strand 8
B
420 426parallel
Strand 9
B
444 449parallel
Strand 10
B
464 468parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
72 76parallel
Strand 3
B
104 108parallel
Strand 4
B
236 239parallel
Strand 5
B
264 269parallel
Strand 6
B
287 291parallel
Strand 7
B
321 325parallel
Strand 8
B
356 359parallel
Strand 9
B
26 30parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 116first strand
Strand 2
B
148 153anti-parallel
Strand 3
B
133 137parallel
Strand 4
B
189 194anti-parallel
Strand 5
B
176 184anti-parallel
Strand 6
B
168 171anti-parallel
Strand 7
B
205 207anti-parallel
Strand 8
B
114 116anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 128first strand
Strand 2
B
198 201anti-parallel
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