Analysis of interatomic Contacts of Structural Units in PDB entry:
8IAZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IAZ entry

There are 4 chains in PDB entry 8IAZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4ALA 387
E
 G 22 C 202
B
 A -14 G 9
C
 C -5 G 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8IAZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 47Right-handed alpha
Helix 2
AA2
A
53 63Right-handed alpha
Helix 3
AA3
A
72 77Right-handed 310
Helix 4
AA4
A
78 98Right-handed alpha
Helix 5
AA5
A
212 214Right-handed 310
Helix 6
AA6
A
215 242Right-handed alpha
Helix 7
AA7
A
248 282Right-handed alpha
Helix 8
AA8
A
293 300Right-handed alpha
Helix 9
AA9
A
303 311Right-handed alpha
Helix 10
AB1
A
311 327Right-handed alpha
Helix 11
AB2
A
370 380Right-handed alpha
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There are 3 sheets in PDB entry 8IAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 119first strand
Strand 2
A
160 166anti-parallel
Strand 3
A
169 175anti-parallel
Strand 4
A
8 13anti-parallel
Strand 5
A
139 143anti-parallel
Strand 6
A
133 135anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 210first strand
Strand 2
A
199 203anti-parallel
Strand 3
A
191 195anti-parallel
Strand 4
A
286 288parallel
Strand 5
A
329 332parallel
Strand 6
A
385 386anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 361first strand
Strand 2
A
367 369anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il