Analysis of interatomic Contacts of Structural Units in PDB entry:
8ID1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ID1 entry

There is 1 chain in PDB entry 8ID1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7THR 786
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 8ID1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 39Right-handed alpha
Helix 2
AA2
A
43 58Right-handed alpha
Helix 3
AA3
A
83 88Right-handed alpha
Helix 4
AA4
A
88 94Right-handed alpha
Helix 5
AA5
A
111 117Right-handed alpha
Helix 6
AA6
A
120 125Right-handed alpha
Helix 7
AA7
A
128 137Right-handed alpha
Helix 8
AA8
A
138 147Right-handed alpha
Helix 9
AA9
A
153 158Right-handed alpha
Helix 10
AB1
A
166 173Right-handed alpha
Helix 11
AB2
A
173 188Right-handed alpha
Helix 12
AB3
A
195 229Right-handed alpha
Helix 13
AB4
A
233 248Right-handed alpha
Helix 14
AB5
A
257 276Right-handed alpha
Helix 15
AB6
A
285 290Right-handed alpha
Helix 16
AB7
A
290 299Right-handed alpha
Helix 17
AB8
A
304 320Right-handed alpha
Helix 18
AB9
A
327 333Right-handed alpha
Helix 19
AC1
A
357 371Right-handed alpha
Helix 20
AC2
A
387 399Right-handed alpha
Helix 21
AC3
A
410 419Right-handed alpha
Helix 22
AC4
A
423 428Right-handed alpha
Helix 23
AC5
A
455 463Right-handed alpha
Helix 24
AC6
A
481 485Right-handed 310
Helix 25
AC7
A
488 521Right-handed alpha
Helix 26
AC8
A
525 528Right-handed 310
Helix 27
AC9
A
529 536Right-handed alpha
Helix 28
AD1
A
556 573Right-handed alpha
Helix 29
AD2
A
578 588Right-handed alpha
Helix 30
AD3
A
595 601Right-handed alpha
Helix 31
AD4
A
610 629Right-handed alpha
Helix 32
AD5
A
647 653Right-handed alpha
Helix 33
AD6
A
683 692Right-handed alpha
Helix 34
AD7
A
694 698Right-handed 310
Helix 35
AD8
A
709 713Right-handed 310
Helix 36
AD9
A
717 733Right-handed alpha
Helix 37
AE1
A
743 753Right-handed alpha
Helix 38
AE2
A
754 758Right-handed 310
Helix 39
AE3
A
772 774Right-handed 310
Helix 40
AE4
A
775 785Right-handed alpha
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There are 7 sheets in PDB entry 8ID1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
79 81parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
451 454anti-parallel
Strand 3
A
551 555parallel
Strand 4
A
639 641parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 345first strand
Strand 2
A
376 381parallel
Strand 3
A
406 409parallel
Strand 4
A
736 741anti-parallel
Strand 5
A
705 708parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 433first strand
Strand 2
A
437 439anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 445first strand
Strand 2
A
546 547parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
632 633first strand
Strand 2
A
636 637anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
761 763first strand
Strand 2
A
768 770anti-parallel
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