Analysis of interatomic Contacts of Structural Units in PDB entry:
8IES

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8IES entry

There is 1 chain in PDB entry 8IES (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
P	ARG 36	GLN 1169

There are 34 helices in PDB entry 8IES. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	P	49	58	Right-handed alpha
Helix 2	AA2	P	59	64	Right-handed 310
Helix 3	AA3	P	69	76	Right-handed alpha
Helix 4	AA4	P	194	199	Right-handed alpha
Helix 5	AA5	P	227	234	Right-handed alpha
Helix 6	AA6	P	238	253	Right-handed alpha
Helix 7	AA7	P	258	287	Right-handed alpha
Helix 8	AA8	P	402	412	Right-handed alpha
Helix 9	AA9	P	423	450	Right-handed alpha
Helix 10	AB1	P	456	467	Right-handed alpha
Helix 11	AB2	P	472	478	Right-handed alpha
Helix 12	AB3	P	478	489	Right-handed alpha
Helix 13	AB4	P	503	507	Right-handed 310
Helix 14	AB5	P	550	557	Right-handed alpha
Helix 15	AB6	P	571	580	Right-handed alpha
Helix 16	AB7	P	609	612	Right-handed 310
Helix 17	AB8	P	656	662	Right-handed alpha
Helix 18	AB9	P	672	682	Right-handed alpha
Helix 19	AC1	P	696	704	Right-handed alpha
Helix 20	AC2	P	732	741	Right-handed alpha
Helix 21	AC3	P	753	765	Right-handed alpha
Helix 22	AC4	P	826	832	Right-handed alpha
Helix 23	AC5	P	840	847	Right-handed alpha
Helix 24	AC6	P	858	868	Right-handed alpha
Helix 25	AC7	P	882	887	Right-handed alpha
Helix 26	AC8	P	915	952	Right-handed alpha
Helix 27	AC9	P	959	969	Right-handed alpha
Helix 28	AD1	P	971	977	Right-handed alpha
Helix 29	AD2	P	998	1025	Right-handed alpha
Helix 30	AD3	P	1046	1066	Right-handed alpha
Helix 31	AD4	P	1078	1094	Right-handed alpha
Helix 32	AD5	P	1117	1136	Right-handed alpha
Helix 33	AD6	P	1141	1147	Right-handed alpha
Helix 34	AD7	P	1157	1167	Right-handed alpha

There are 8 sheets in PDB entry 8IES. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	39	43	first strand
Strand 2	P	88	92	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	105	106	first strand
Strand 2	P	164	168	anti-parallel
Strand 3	P	171	175	anti-parallel
Strand 4	P	182	184	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	297	298	first strand
Strand 2	P	304	305	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	317	318	first strand
Strand 2	P	392	395	anti-parallel
Strand 3	P	331	335	anti-parallel
Strand 4	P	373	374	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	338	340	first strand
Strand 2	P	352	354	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	823	825	first strand
Strand 2	P	848	851	parallel
Strand 3	P	745	749	parallel
Strand 4	P	509	512	parallel
Strand 5	P	873	876	parallel
Strand 6	P	892	893	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	528	530	first strand
Strand 2	P	717	725	anti-parallel
Strand 3	P	685	693	anti-parallel
Strand 4	P	650	655	anti-parallel
Strand 5	P	636	642	anti-parallel
Strand 6	P	623	627	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	584	586	first strand
Strand 2	P	613	615	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8IES

Analysis of interatomic Contacts of Structural Units in PDB entry:
8IES