Analysis of interatomic Contacts of Structural Units in PDB entry:
8IEU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IEU entry

There are 2 chains in PDB entry 8IEU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP -1ASP 332
B
ASP -1LEU 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 8IEU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
-1 18Right-handed alpha
Helix 2
AA2
A
36 41Right-handed alpha
Helix 3
AA3
A
49 67Right-handed alpha
Helix 4
AA4
A
68 71Right-handed 310
Helix 5
AA5
A
72 84Right-handed alpha
Helix 6
AA6
A
85 98Right-handed alpha
Helix 7
AA7
A
99 102Right-handed 310
Helix 8
AA8
A
107 125Right-handed alpha
Helix 9
AA9
A
127 152Right-handed alpha
Helix 10
AB1
A
153 155Right-handed 310
Helix 11
AB2
A
166 182Right-handed alpha
Helix 12
AB3
A
183 199Right-handed alpha
Helix 13
AB4
A
216 229Right-handed alpha
Helix 14
AB5
A
230 242Right-handed alpha
Helix 15
AB6
A
244 248Right-handed 310
Helix 16
AB7
A
250 255Right-handed 310
Helix 17
AB8
A
268 286Right-handed alpha
Helix 18
AB9
A
289 308Right-handed alpha
Helix 19
AC1
A
309 311Right-handed 310
Helix 20
AC2
A
314 319Right-handed alpha
Helix 21
AC3
A
320 330Right-handed alpha
Helix 22
AC4
B
0 18Right-handed alpha
Helix 23
AC5
B
36 41Right-handed alpha
Helix 24
AC6
B
49 67Right-handed alpha
Helix 25
AC7
B
68 71Right-handed 310
Helix 26
AC8
B
72 84Right-handed alpha
Helix 27
AC9
B
85 98Right-handed alpha
Helix 28
AD1
B
99 102Right-handed 310
Helix 29
AD2
B
107 125Right-handed alpha
Helix 30
AD3
B
127 152Right-handed alpha
Helix 31
AD4
B
153 155Right-handed 310
Helix 32
AD5
B
166 182Right-handed alpha
Helix 33
AD6
B
183 199Right-handed alpha
Helix 34
AD7
B
216 229Right-handed alpha
Helix 35
AD8
B
230 242Right-handed alpha
Helix 36
AD9
B
244 248Right-handed 310
Helix 37
AE1
B
250 255Right-handed 310
Helix 38
AE2
B
268 286Right-handed alpha
Helix 39
AE3
B
289 309Right-handed alpha
Helix 40
AE4
B
314 319Right-handed alpha
Helix 41
AE5
B
320 331Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 8IEU.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
22 28first strand
Strand 2
B
22 28anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il