Analysis of interatomic Contacts of Structural Units in PDB entry:
8IG0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8IG0 entry

There are 4 chains in PDB entry 8IG0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	GLN 582
B	GLY 2	GLN 584
C	GLY 2	SER 583
D	GLY 2	ALA 581

There are 98 helices in PDB entry 8IG0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	9	Right-handed alpha
Helix 2	AA2	A	15	29	Right-handed alpha
Helix 3	AA3	A	33	49	Right-handed alpha
Helix 4	AA4	A	82	101	Right-handed alpha
Helix 5	AA5	A	102	106	Right-handed 310
Helix 6	AA6	A	114	128	Right-handed alpha
Helix 7	AA7	A	142	150	Right-handed alpha
Helix 8	AA8	A	153	168	Right-handed alpha
Helix 9	AA9	A	211	217	Right-handed alpha
Helix 10	AB1	A	222	226	Right-handed 310
Helix 11	AB2	A	231	242	Right-handed alpha
Helix 12	AB3	A	253	270	Right-handed alpha
Helix 13	AB4	A	276	290	Right-handed alpha
Helix 14	AB5	A	297	313	Right-handed alpha
Helix 15	AB6	A	318	331	Right-handed alpha
Helix 16	AB7	A	333	349	Right-handed alpha
Helix 17	AB8	A	354	356	Right-handed 310
Helix 18	AB9	A	357	370	Right-handed alpha
Helix 19	AC1	A	370	384	Right-handed alpha
Helix 20	AC2	A	406	425	Right-handed alpha
Helix 21	AC3	A	433	445	Right-handed alpha
Helix 22	AC4	A	448	453	Right-handed alpha
Helix 23	AC5	A	555	561	Right-handed alpha
Helix 24	AC6	A	573	580	Right-handed alpha
Helix 25	AC7	B	4	9	Right-handed alpha
Helix 26	AC8	B	15	28	Right-handed alpha
Helix 27	AC9	B	33	49	Right-handed alpha
Helix 28	AD1	B	82	101	Right-handed alpha
Helix 29	AD2	B	102	106	Right-handed 310
Helix 30	AD3	B	114	127	Right-handed alpha
Helix 31	AD4	B	142	149	Right-handed alpha
Helix 32	AD5	B	153	168	Right-handed alpha
Helix 33	AD6	B	211	217	Right-handed alpha
Helix 34	AD7	B	222	226	Right-handed 310
Helix 35	AD8	B	231	242	Right-handed alpha
Helix 36	AD9	B	253	270	Right-handed alpha
Helix 37	AE1	B	276	290	Right-handed alpha
Helix 38	AE2	B	297	314	Right-handed alpha
Helix 39	AE3	B	318	331	Right-handed alpha
Helix 40	AE4	B	333	349	Right-handed alpha
Helix 41	AE5	B	354	356	Right-handed 310
Helix 42	AE6	B	357	370	Right-handed alpha
Helix 43	AE7	B	370	385	Right-handed alpha
Helix 44	AE8	B	402	405	Right-handed 310
Helix 45	AE9	B	406	425	Right-handed alpha
Helix 46	AF1	B	433	445	Right-handed alpha
Helix 47	AF2	B	448	454	Right-handed alpha
Helix 48	AF3	B	555	560	Right-handed alpha
Helix 49	AF4	B	561	567	Right-handed alpha
Helix 50	AF5	B	571	580	Right-handed alpha
Helix 51	AF6	C	4	9	Right-handed alpha
Helix 52	AF7	C	15	28	Right-handed alpha
Helix 53	AF8	C	33	49	Right-handed alpha
Helix 54	AF9	C	82	101	Right-handed alpha
Helix 55	AG1	C	102	106	Right-handed 310
Helix 56	AG2	C	114	129	Right-handed alpha
Helix 57	AG3	C	142	150	Right-handed alpha
Helix 58	AG4	C	153	168	Right-handed alpha
Helix 59	AG5	C	211	217	Right-handed alpha
Helix 60	AG6	C	222	226	Right-handed 310
Helix 61	AG7	C	231	242	Right-handed alpha
Helix 62	AG8	C	253	270	Right-handed alpha
Helix 63	AG9	C	276	290	Right-handed alpha
Helix 64	AH1	C	297	313	Right-handed alpha
Helix 65	AH2	C	318	331	Right-handed alpha
Helix 66	AH3	C	333	349	Right-handed alpha
Helix 67	AH4	C	354	356	Right-handed 310
Helix 68	AH5	C	357	370	Right-handed alpha
Helix 69	AH6	C	370	382	Right-handed alpha
Helix 70	AH7	C	406	425	Right-handed alpha
Helix 71	AH8	C	433	445	Right-handed alpha
Helix 72	AH9	C	448	454	Right-handed alpha
Helix 73	AI1	C	555	560	Right-handed alpha
Helix 74	AI2	C	561	567	Right-handed alpha
Helix 75	AI3	C	571	580	Right-handed alpha
Helix 76	AI4	D	4	9	Right-handed alpha
Helix 77	AI5	D	15	29	Right-handed alpha
Helix 78	AI6	D	33	49	Right-handed alpha
Helix 79	AI7	D	82	101	Right-handed alpha
Helix 80	AI8	D	108	112	Right-handed 310
Helix 81	AI9	D	114	128	Right-handed alpha
Helix 82	AJ1	D	142	150	Right-handed alpha
Helix 83	AJ2	D	153	168	Right-handed alpha
Helix 84	AJ3	D	211	217	Right-handed alpha
Helix 85	AJ4	D	222	226	Right-handed 310
Helix 86	AJ5	D	231	242	Right-handed alpha
Helix 87	AJ6	D	253	270	Right-handed alpha
Helix 88	AJ7	D	276	290	Right-handed alpha
Helix 89	AJ8	D	297	313	Right-handed alpha
Helix 90	AJ9	D	318	330	Right-handed alpha
Helix 91	AK1	D	333	349	Right-handed alpha
Helix 92	AK2	D	354	356	Right-handed 310
Helix 93	AK3	D	357	370	Right-handed alpha
Helix 94	AK4	D	370	382	Right-handed alpha
Helix 95	AK5	D	406	425	Right-handed alpha
Helix 96	AK6	D	433	446	Right-handed alpha
Helix 97	AK7	D	555	560	Right-handed alpha
Helix 98	AK8	D	571	579	Right-handed alpha

There are 13 sheets in PDB entry 8IG0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	67	first strand
Strand 2	A	75	79	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	194	first strand
Strand 2	A	182	186	anti-parallel
Strand 3	A	174	177	anti-parallel
Strand 4	A	228	229	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	246	248	first strand
Strand 2	A	251	252	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	456	457	first strand
Strand 2	A	550	551	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	64	first strand
Strand 2	B	78	80	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	194	first strand
Strand 2	B	182	186	anti-parallel
Strand 3	B	174	177	anti-parallel
Strand 4	B	228	229	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	64	first strand
Strand 2	C	78	79	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	194	first strand
Strand 2	C	182	186	anti-parallel
Strand 3	C	174	177	anti-parallel
Strand 4	C	228	229	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	246	248	first strand
Strand 2	C	251	252	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	456	457	first strand
Strand 2	C	550	551	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	67	first strand
Strand 2	D	75	79	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	194	first strand
Strand 2	D	182	186	anti-parallel
Strand 3	D	174	177	anti-parallel
Strand 4	D	228	229	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	456	458	first strand
Strand 2	D	550	552	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8IG0

Analysis of interatomic Contacts of Structural Units in PDB entry:
8IG0