Analysis of interatomic Contacts of Structural Units in PDB entry:
8IGR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8IGR entry

There are 12 chains in PDB entry 8IGR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	THR 6	GLY 315
H	SER 4	LEU 234
I	VAL 2	GLU 1342
J	GLU 16	ALA 1375
K	ALA 2	ALA 77
L	GLY 92	LEU 611
A	ARG 7	ASN 80
B	LYS 6	LEU 78
C	LYS 6	THR 79
D	ASN 8	LEU 78
N	C 17	A 77
T	T 9	G 69

There are143 helices in PDB entry 8IGR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	50	Right-handed alpha
Helix 2	AA2	G	77	86	Right-handed alpha
Helix 3	AA3	G	154	159	Right-handed alpha
Helix 4	AA4	G	212	234	Right-handed alpha
Helix 5	AA5	G	256	260	Right-handed 310
Helix 6	AA6	G	263	273	Right-handed alpha
Helix 7	AA7	G	277	282	Right-handed alpha
Helix 8	AA8	G	285	291	Right-handed alpha
Helix 9	AA9	G	296	310	Right-handed alpha
Helix 10	AB1	H	34	50	Right-handed alpha
Helix 11	AB2	H	77	87	Right-handed alpha
Helix 12	AB3	H	212	228	Right-handed alpha
Helix 13	AB4	I	4	9	Right-handed alpha
Helix 14	AB5	I	28	40	Right-handed alpha
Helix 15	AB6	I	47	57	Right-handed alpha
Helix 16	AB7	I	81	89	Right-handed alpha
Helix 17	AB8	I	206	213	Right-handed alpha
Helix 18	AB9	I	216	224	Right-handed alpha
Helix 19	AC1	I	347	354	Right-handed alpha
Helix 20	AC2	I	358	371	Right-handed alpha
Helix 21	AC3	I	377	389	Right-handed alpha
Helix 22	AC4	I	398	409	Right-handed alpha
Helix 23	AC5	I	421	438	Right-handed alpha
Helix 24	AC6	I	455	480	Right-handed alpha
Helix 25	AC7	I	494	508	Right-handed alpha
Helix 26	AC8	I	519	528	Right-handed alpha
Helix 27	AC9	I	544	549	Right-handed alpha
Helix 28	AD1	I	551	555	Right-handed 310
Helix 29	AD2	I	608	612	Right-handed alpha
Helix 30	AD3	I	648	650	Right-handed 310
Helix 31	AD4	I	664	668	Right-handed 310
Helix 32	AD5	I	670	674	Right-handed 310
Helix 33	AD6	I	675	687	Right-handed alpha
Helix 34	AD7	I	704	712	Right-handed alpha
Helix 35	AD8	I	738	741	Right-handed 310
Helix 36	AD9	I	820	825	Right-handed alpha
Helix 37	AE1	I	859	863	Right-handed 310
Helix 38	AE2	I	899	906	Right-handed alpha
Helix 39	AE3	I	942	967	Right-handed alpha
Helix 40	AE4	I	1022	1038	Right-handed alpha
Helix 41	AE5	I	1101	1106	Right-handed alpha
Helix 42	AE6	I	1109	1134	Right-handed alpha
Helix 43	AE7	I	1137	1151	Right-handed alpha
Helix 44	AE8	I	1160	1164	Right-handed 310
Helix 45	AE9	I	1165	1176	Right-handed alpha
Helix 46	AF1	I	1191	1202	Right-handed alpha
Helix 47	AF2	I	1271	1281	Right-handed alpha
Helix 48	AF3	I	1283	1293	Right-handed alpha
Helix 49	AF4	I	1297	1310	Right-handed alpha
Helix 50	AF5	I	1320	1333	Right-handed alpha
Helix 51	AF6	J	26	33	Right-handed alpha
Helix 52	AF7	J	58	63	Right-handed alpha
Helix 53	AF8	J	77	81	Right-handed 310
Helix 54	AF9	J	95	100	Right-handed 310
Helix 55	AG1	J	113	118	Right-handed alpha
Helix 56	AG2	J	122	129	Right-handed alpha
Helix 57	AG3	J	131	140	Right-handed alpha
Helix 58	AG4	J	161	172	Right-handed alpha
Helix 59	AG5	J	180	192	Right-handed alpha
Helix 60	AG6	J	193	207	Right-handed alpha
Helix 61	AG7	J	210	230	Right-handed alpha
Helix 62	AG8	J	233	236	Right-handed 310
Helix 63	AG9	J	246	250	Right-handed 310
Helix 64	AH1	J	263	286	Right-handed alpha
Helix 65	AH2	J	288	308	Right-handed alpha
Helix 66	AH3	J	336	341	Right-handed alpha
Helix 67	AH4	J	370	377	Right-handed alpha
Helix 68	AH5	J	377	388	Right-handed alpha
Helix 69	AH6	J	393	404	Right-handed alpha
Helix 70	AH7	J	405	416	Right-handed alpha
Helix 71	AH8	J	430	432	Right-handed 310
Helix 72	AH9	J	450	452	Right-handed 310
Helix 73	AI1	J	453	458	Right-handed alpha
Helix 74	AI2	J	473	483	Right-handed alpha
Helix 75	AI3	J	504	515	Right-handed alpha
Helix 76	AI4	J	529	539	Right-handed alpha
Helix 77	AI5	J	573	581	Right-handed alpha
Helix 78	AI6	J	588	593	Right-handed 310
Helix 79	AI7	J	597	612	Right-handed alpha
Helix 80	AI8	J	613	636	Right-handed alpha
Helix 81	AI9	J	649	670	Right-handed alpha
Helix 82	AJ1	J	674	703	Right-handed alpha
Helix 83	AJ2	J	720	728	Right-handed alpha
Helix 84	AJ3	J	733	741	Right-handed alpha
Helix 85	AJ4	J	768	788	Right-handed alpha
Helix 86	AJ5	J	789	805	Right-handed alpha
Helix 87	AJ6	J	865	876	Right-handed alpha
Helix 88	AJ7	J	884	888	Right-handed 310
Helix 89	AJ8	J	896	900	Right-handed alpha
Helix 90	AJ9	J	914	925	Right-handed alpha
Helix 91	AK1	J	926	929	Right-handed 310
Helix 92	AK2	J	1138	1147	Right-handed alpha
Helix 93	AK3	J	1216	1224	Right-handed alpha
Helix 94	AK4	J	1225	1244	Right-handed alpha
Helix 95	AK5	J	1249	1261	Right-handed alpha
Helix 96	AK6	J	1282	1292	Right-handed alpha
Helix 97	AK7	J	1308	1315	Right-handed alpha
Helix 98	AK8	J	1318	1324	Right-handed alpha
Helix 99	AK9	J	1327	1339	Right-handed alpha
Helix 100	AL1	J	1346	1353	Right-handed alpha
Helix 101	AL2	J	1361	1374	Right-handed alpha
Helix 102	AL3	K	7	14	Right-handed alpha
Helix 103	AL4	K	17	32	Right-handed alpha
Helix 104	AL5	K	45	56	Right-handed alpha
Helix 105	AL6	K	60	76	Right-handed alpha
Helix 106	AL7	L	96	106	Right-handed alpha
Helix 107	AL8	L	114	136	Right-handed alpha
Helix 108	AL9	L	137	153	Right-handed alpha
Helix 109	AM1	L	366	374	Right-handed alpha
Helix 110	AM2	L	376	383	Right-handed alpha
Helix 111	AM3	L	383	390	Right-handed alpha
Helix 112	AM4	L	391	395	Right-handed 310
Helix 113	AM5	L	400	419	Right-handed alpha
Helix 114	AM6	L	420	424	Right-handed 310
Helix 115	AM7	L	426	447	Right-handed alpha
Helix 116	AM8	L	453	475	Right-handed alpha
Helix 117	AM9	L	482	487	Right-handed alpha
Helix 118	AN1	L	491	500	Right-handed alpha
Helix 119	AN2	L	518	523	Right-handed 310
Helix 120	AN3	L	530	549	Right-handed alpha
Helix 121	AN4	L	552	563	Right-handed alpha
Helix 122	AN5	L	572	581	Right-handed alpha
Helix 123	AN6	L	583	599	Right-handed alpha
Helix 124	AN7	L	604	610	Right-handed alpha
Helix 125	AN8	A	8	25	Right-handed alpha
Helix 126	AN9	A	25	34	Right-handed alpha
Helix 127	AO1	A	36	47	Right-handed alpha
Helix 128	AO2	A	47	60	Right-handed alpha
Helix 129	AO3	A	63	78	Right-handed alpha
Helix 130	AO4	B	7	25	Right-handed alpha
Helix 131	AO5	B	25	33	Right-handed alpha
Helix 132	AO6	B	36	38	Right-handed 310
Helix 133	AO7	B	39	58	Right-handed alpha
Helix 134	AO8	B	64	78	Right-handed alpha
Helix 135	AO9	C	7	25	Right-handed alpha
Helix 136	AP1	C	25	34	Right-handed alpha
Helix 137	AP2	C	36	47	Right-handed alpha
Helix 138	AP3	C	47	59	Right-handed alpha
Helix 139	AP4	C	64	79	Right-handed alpha
Helix 140	AP5	D	9	25	Right-handed alpha
Helix 141	AP6	D	25	34	Right-handed alpha
Helix 142	AP7	D	39	59	Right-handed alpha
Helix 143	AP8	D	61	78	Right-handed alpha

There are 42 sheets in PDB entry 8IGR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	17	first strand
Strand 2	G	23	31	anti-parallel
Strand 3	G	198	207	anti-parallel
Strand 4	G	180	190	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	53	first strand
Strand 2	G	149	153	anti-parallel
Strand 3	G	175	177	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	115	116	first strand
Strand 2	G	97	105	anti-parallel
Strand 3	G	139	147	anti-parallel
Strand 4	G	56	61	anti-parallel
Strand 5	G	171	172	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	92	first strand
Strand 2	G	121	123	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	111	first strand
Strand 2	G	129	133	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	18	first strand
Strand 2	H	23	31	anti-parallel
Strand 3	H	198	207	anti-parallel
Strand 4	H	180	190	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	61	first strand
Strand 2	H	142	149	anti-parallel
Strand 3	H	97	101	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	91	first strand
Strand 2	H	122	123	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	104	105	first strand
Strand 2	H	139	140	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	109	111	first strand
Strand 2	H	129	132	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	175	176	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	13	14	first strand
Strand 2	I	1182	1183	parallel
Strand 3	I	700	701	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	66	75	anti-parallel
Strand 3	I	93	105	anti-parallel
Strand 4	I	114	128	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	137	first strand
Strand 2	I	142	145	anti-parallel
Strand 3	I	512	514	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	451	454	first strand
Strand 2	I	147	151	anti-parallel
Strand 3	I	530	531	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	157	first strand
Strand 2	I	173	177	anti-parallel
Strand 3	I	184	188	anti-parallel
Strand 4	I	194	198	anti-parallel
Strand 5	I	204	205	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	599	607	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	652	654	anti-parallel
Strand 4	I	616	617	parallel
Strand 5	I	633	637	anti-parallel
Strand 6	I	642	646	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	716	717	first strand
Strand 2	I	782	785	anti-parallel
Strand 3	I	768	769	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	748	752	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	722	728	anti-parallel
Strand 4	I	776	777	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	757	758	first strand
Strand 2	I	764	765	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	789	790	first strand
Strand 2	I	793	794	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1066	1067	first strand
Strand 2	I	1225	1234	anti-parallel
Strand 3	I	798	804	anti-parallel
Strand 4	I	1096	1098	parallel
Strand 5	I	816	819	anti-parallel
Strand 6	I	1076	1080	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1066	1067	first strand
Strand 2	I	1225	1234	anti-parallel
Strand 3	I	1209	1210	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	831	first strand
Strand 2	I	1057	1058	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	846	847	first strand
Strand 2	I	834	843	anti-parallel
Strand 3	I	1046	1055	anti-parallel
Strand 4	I	927	935	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	882	884	first strand
Strand 2	I	918	919	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	887	889	first strand
Strand 2	I	913	915	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1268	1270	first strand
Strand 2	J	345	347	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1339	first strand
Strand 2	J	19	24	anti-parallel
Strand 3	J	1341	1343	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	34	37	first strand
Strand 2	J	102	112	parallel
Strand 3	J	238	244	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	159	160	first strand
Strand 2	J	144	146	anti-parallel
Strand 3	J	178	179	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	252	255	first strand
Strand 2	J	259	262	anti-parallel
Strand 3	L	505	506	parallel

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There are 7 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	350	356	first strand
Strand 2	J	447	448	parallel
Strand 3	J	365	369	anti-parallel
Strand 4	J	434	442	parallel
Strand 5	J	421	425	anti-parallel
Strand 6	J	465	469	anti-parallel
Strand 7	J	350	356	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	526	527	first strand
Strand 2	J	548	556	parallel
Strand 3	J	564	572	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	706	707	first strand
Strand 2	J	714	715	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	809	811	first strand
Strand 2	J	894	895	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	820	822	first strand
Strand 2	J	880	882	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	825	826	first strand
Strand 2	J	831	833	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	848	849	first strand
Strand 2	J	856	858	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1187	1189	first strand
Strand 2	J	1174	1178	anti-parallel
Strand 3	J	1161	1165	anti-parallel
Strand 4	J	1203	1204	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1268	anti-parallel
Strand 3	J	1301	1304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8IGR

Analysis of interatomic Contacts of Structural Units in PDB entry:
8IGR