Analysis of interatomic Contacts of Structural Units in PDB entry:
8IGT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IGT entry

There is 1 chain in PDB entry 8IGT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 323HIS 534
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 8IGT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
333 337Right-handed 310
Helix 2
AA2
A
416 419Right-handed 310
Helix 3
AA3
A
526 530Right-handed 310
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There are 3 sheets in PDB entry 8IGT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 327first strand
Strand 2
A
385 391parallel
Strand 3
A
497 499anti-parallel
Strand 4
A
349 352anti-parallel
Strand 5
A
341 343anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 327first strand
Strand 2
A
385 391parallel
Strand 3
A
449 455anti-parallel
Strand 4
A
460 465anti-parallel
Strand 5
A
470 474anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 376first strand
Strand 2
A
484 490anti-parallel
Strand 3
A
398 404anti-parallel
Strand 4
A
421 427anti-parallel
Strand 5
A
430 433anti-parallel
Strand 6
A
440 441anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il