Analysis of interatomic Contacts of Structural Units in PDB entry:
8IH5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8IH5 entry

There are 2 chains in PDB entry 8IH5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	THR 80	ILE 767
A	THR 79	ALA 647

There are201 helices in PDB entry 8IH5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	80	93	Right-handed alpha
Helix 2	AA2	F	102	111	Right-handed alpha
Helix 3	AA3	F	123	133	Right-handed alpha
Helix 4	AA4	F	148	163	Right-handed alpha
Helix 5	AA5	F	168	183	Right-handed alpha
Helix 6	AA6	F	184	188	Right-handed 310
Helix 7	AA7	F	197	211	Right-handed alpha
Helix 8	AA8	F	220	237	Right-handed alpha
Helix 9	AA9	F	239	244	Right-handed 310
Helix 10	AB1	F	247	252	Right-handed 310
Helix 11	AB2	F	260	265	Right-handed alpha
Helix 12	AB3	F	266	268	Right-handed 310
Helix 13	AB4	F	277	288	Right-handed alpha
Helix 14	AB5	F	290	305	Right-handed alpha
Helix 15	AB6	F	316	328	Right-handed alpha
Helix 16	AB7	F	331	336	Right-handed 310
Helix 17	AB8	F	339	348	Right-handed alpha
Helix 18	AB9	F	368	379	Right-handed alpha
Helix 19	AC1	F	384	390	Right-handed 310
Helix 20	AC2	F	409	418	Right-handed alpha
Helix 21	AC3	F	428	444	Right-handed alpha
Helix 22	AC4	F	459	470	Right-handed alpha
Helix 23	AC5	F	471	475	Right-handed 310
Helix 24	AC6	F	476	485	Right-handed alpha
Helix 25	AC7	F	509	541	Right-handed alpha
Helix 26	AC8	F	552	563	Right-handed alpha
Helix 27	AC9	F	570	595	Right-handed alpha
Helix 28	AD1	F	604	611	Right-handed 310
Helix 29	AD2	F	619	635	Right-handed alpha
Helix 30	AD3	F	642	657	Right-handed alpha
Helix 31	AD4	F	666	696	Right-handed alpha
Helix 32	AD5	F	699	722	Right-handed alpha
Helix 33	AD6	F	729	748	Right-handed alpha
Helix 34	AD7	F	750	762	Right-handed alpha
Helix 35	AD8	A	80	92	Right-handed alpha
Helix 36	AD9	A	102	111	Right-handed alpha
Helix 37	AE1	A	123	133	Right-handed alpha
Helix 38	AE2	A	148	163	Right-handed alpha
Helix 39	AE3	A	168	183	Right-handed alpha
Helix 40	AE4	A	184	188	Right-handed 310
Helix 41	AE5	A	197	211	Right-handed alpha
Helix 42	AE6	A	221	237	Right-handed alpha
Helix 43	AE7	A	240	244	Right-handed 310
Helix 44	AE8	A	248	252	Right-handed 310
Helix 45	AE9	A	277	288	Right-handed alpha
Helix 46	AF1	A	291	304	Right-handed alpha
Helix 47	AF2	A	314	330	Right-handed alpha
Helix 48	AF3	A	331	335	Right-handed 310
Helix 49	AF4	A	338	349	Right-handed alpha
Helix 50	AF5	A	365	379	Right-handed alpha
Helix 51	AF6	A	384	390	Right-handed 310
Helix 52	AF7	A	408	419	Right-handed alpha
Helix 53	AF8	A	428	447	Right-handed alpha
Helix 54	AF9	A	460	470	Right-handed alpha
Helix 55	AG1	A	471	475	Right-handed 310
Helix 56	AG2	A	476	485	Right-handed alpha
Helix 57	AG3	A	509	539	Right-handed alpha
Helix 58	AG4	A	540	541	Right-handed 310
Helix 59	AG5	A	542	546	Right-handed 310
Helix 60	AG6	A	549	565	Right-handed alpha
Helix 61	AG7	A	570	595	Right-handed alpha
Helix 62	AG8	A	596	600	Right-handed 310
Helix 63	AG9	A	605	611	Right-handed 310
Helix 64	AH1	A	617	635	Right-handed alpha
Helix 65	AH2	A	642	659	Right-handed alpha
Helix 66	AH3	A	666	695	Right-handed alpha
Helix 67	AH4	A	700	723	Right-handed alpha
Helix 68	AH5	A	729	748	Right-handed alpha
Helix 69	AH6	A	750	762	Right-handed alpha
Helix 70	AH7	B	81	92	Right-handed alpha
Helix 71	AH8	B	103	110	Right-handed alpha
Helix 72	AH9	B	123	131	Right-handed alpha
Helix 73	AI1	B	147	163	Right-handed alpha
Helix 74	AI2	B	164	166	Right-handed 310
Helix 75	AI3	B	168	183	Right-handed alpha
Helix 76	AI4	B	184	189	Right-handed 310
Helix 77	AI5	B	197	211	Right-handed alpha
Helix 78	AI6	B	220	237	Right-handed alpha
Helix 79	AI7	B	238	243	Right-handed alpha
Helix 80	AI8	B	247	252	Right-handed 310
Helix 81	AI9	B	263	267	Right-handed 310
Helix 82	AJ1	B	277	288	Right-handed alpha
Helix 83	AJ2	B	290	305	Right-handed alpha
Helix 84	AJ3	B	314	328	Right-handed alpha
Helix 85	AJ4	B	330	335	Right-handed 310
Helix 86	AJ5	B	337	349	Right-handed alpha
Helix 87	AJ6	B	366	379	Right-handed alpha
Helix 88	AJ7	B	384	392	Right-handed 310
Helix 89	AJ8	B	408	421	Right-handed alpha
Helix 90	AJ9	B	428	447	Right-handed alpha
Helix 91	AK1	B	459	469	Right-handed alpha
Helix 92	AK2	B	471	475	Right-handed 310
Helix 93	AK3	B	476	485	Right-handed alpha
Helix 94	AK4	B	509	540	Right-handed alpha
Helix 95	AK5	B	549	565	Right-handed alpha
Helix 96	AK6	B	570	595	Right-handed alpha
Helix 97	AK7	B	604	611	Right-handed 310
Helix 98	AK8	B	619	635	Right-handed alpha
Helix 99	AK9	B	642	657	Right-handed alpha
Helix 100	AL1	B	666	696	Right-handed alpha
Helix 101	AL2	B	700	723	Right-handed alpha
Helix 102	AL3	B	729	748	Right-handed alpha
Helix 103	AL4	B	750	762	Right-handed alpha
Helix 104	AL5	C	81	92	Right-handed alpha
Helix 105	AL6	C	103	111	Right-handed alpha
Helix 106	AL7	C	123	133	Right-handed alpha
Helix 107	AL8	C	147	164	Right-handed alpha
Helix 108	AL9	C	168	183	Right-handed alpha
Helix 109	AM1	C	184	186	Right-handed 310
Helix 110	AM2	C	201	212	Right-handed alpha
Helix 111	AM3	C	223	237	Right-handed alpha
Helix 112	AM4	C	240	244	Right-handed 310
Helix 113	AM5	C	247	251	Right-handed 310
Helix 114	AM6	C	277	288	Right-handed alpha
Helix 115	AM7	C	290	305	Right-handed alpha
Helix 116	AM8	C	316	330	Right-handed alpha
Helix 117	AM9	C	331	335	Right-handed 310
Helix 118	AN1	C	338	349	Right-handed alpha
Helix 119	AN2	C	365	379	Right-handed alpha
Helix 120	AN3	C	384	392	Right-handed 310
Helix 121	AN4	C	410	418	Right-handed alpha
Helix 122	AN5	C	428	447	Right-handed alpha
Helix 123	AN6	C	459	470	Right-handed alpha
Helix 124	AN7	C	471	475	Right-handed 310
Helix 125	AN8	C	476	485	Right-handed alpha
Helix 126	AN9	C	508	540	Right-handed alpha
Helix 127	AO1	C	549	563	Right-handed alpha
Helix 128	AO2	C	570	595	Right-handed alpha
Helix 129	AO3	C	604	611	Right-handed 310
Helix 130	AO4	C	620	635	Right-handed alpha
Helix 131	AO5	C	642	659	Right-handed alpha
Helix 132	AO6	C	666	696	Right-handed alpha
Helix 133	AO7	C	699	723	Right-handed alpha
Helix 134	AO8	C	729	746	Right-handed alpha
Helix 135	AO9	C	750	762	Right-handed alpha
Helix 136	AP1	D	81	93	Right-handed alpha
Helix 137	AP2	D	102	111	Right-handed alpha
Helix 138	AP3	D	123	131	Right-handed alpha
Helix 139	AP4	D	147	166	Right-handed alpha
Helix 140	AP5	D	171	183	Right-handed alpha
Helix 141	AP6	D	184	186	Right-handed 310
Helix 142	AP7	D	197	212	Right-handed alpha
Helix 143	AP8	D	220	237	Right-handed alpha
Helix 144	AP9	D	247	252	Right-handed 310
Helix 145	AQ1	D	260	264	Right-handed 310
Helix 146	AQ2	D	277	286	Right-handed alpha
Helix 147	AQ3	D	291	304	Right-handed alpha
Helix 148	AQ4	D	316	328	Right-handed alpha
Helix 149	AQ5	D	331	336	Right-handed 310
Helix 150	AQ6	D	338	349	Right-handed alpha
Helix 151	AQ7	D	365	379	Right-handed alpha
Helix 152	AQ8	D	384	392	Right-handed 310
Helix 153	AQ9	D	408	418	Right-handed alpha
Helix 154	AR1	D	428	447	Right-handed alpha
Helix 155	AR2	D	459	470	Right-handed alpha
Helix 156	AR3	D	471	475	Right-handed 310
Helix 157	AR4	D	476	485	Right-handed alpha
Helix 158	AR5	D	509	540	Right-handed alpha
Helix 159	AR6	D	549	563	Right-handed alpha
Helix 160	AR7	D	570	593	Right-handed alpha
Helix 161	AR8	D	604	611	Right-handed 310
Helix 162	AR9	D	621	635	Right-handed alpha
Helix 163	AS1	D	642	657	Right-handed alpha
Helix 164	AS2	D	666	696	Right-handed alpha
Helix 165	AS3	D	699	723	Right-handed alpha
Helix 166	AS4	D	729	746	Right-handed alpha
Helix 167	AS5	D	750	762	Right-handed alpha
Helix 168	AS6	E	81	92	Right-handed alpha
Helix 169	AS7	E	102	111	Right-handed alpha
Helix 170	AS8	E	123	133	Right-handed alpha
Helix 171	AS9	E	147	166	Right-handed alpha
Helix 172	AT1	E	168	183	Right-handed alpha
Helix 173	AT2	E	184	189	Right-handed 310
Helix 174	AT3	E	197	212	Right-handed alpha
Helix 175	AT4	E	223	237	Right-handed alpha
Helix 176	AT5	E	238	243	Right-handed alpha
Helix 177	AT6	E	247	252	Right-handed 310
Helix 178	AT7	E	260	265	Right-handed alpha
Helix 179	AT8	E	277	288	Right-handed alpha
Helix 180	AT9	E	290	304	Right-handed alpha
Helix 181	AU1	E	314	330	Right-handed alpha
Helix 182	AU2	E	331	334	Right-handed 310
Helix 183	AU3	E	335	349	Right-handed alpha
Helix 184	AU4	E	366	378	Right-handed alpha
Helix 185	AU5	E	384	392	Right-handed 310
Helix 186	AU6	E	409	421	Right-handed alpha
Helix 187	AU7	E	428	446	Right-handed alpha
Helix 188	AU8	E	459	470	Right-handed alpha
Helix 189	AU9	E	471	475	Right-handed 310
Helix 190	AV1	E	476	485	Right-handed alpha
Helix 191	AV2	E	510	540	Right-handed alpha
Helix 192	AV3	E	549	563	Right-handed alpha
Helix 193	AV4	E	570	595	Right-handed alpha
Helix 194	AV5	E	596	600	Right-handed 310
Helix 195	AV6	E	604	611	Right-handed 310
Helix 196	AV7	E	617	635	Right-handed alpha
Helix 197	AV8	E	642	659	Right-handed alpha
Helix 198	AV9	E	666	696	Right-handed alpha
Helix 199	AW1	E	701	723	Right-handed alpha
Helix 200	AW2	E	729	747	Right-handed alpha
Helix 201	AW3	E	750	762	Right-handed alpha

There are 8 sheets in PDB entry 8IH5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	392	393	first strand
Strand 2	F	396	397	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	495	496	first strand
Strand 2	F	500	501	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	392	393	first strand
Strand 2	A	396	397	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	455	456	first strand
Strand 2	A	494	496	anti-parallel
Strand 3	A	500	501	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	102	first strand
Strand 2	B	308	309	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	455	456	first strand
Strand 2	C	494	495	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	455	456	first strand
Strand 2	D	494	496	anti-parallel
Strand 3	D	500	501	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	455	456	first strand
Strand 2	E	494	496	anti-parallel
Strand 3	E	500	501	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8IH5

Analysis of interatomic Contacts of Structural Units in PDB entry:
8IH5