Analysis of interatomic Contacts of Structural Units in PDB entry:
8IHK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IHK entry

There is 1 chain in PDB entry 8IHK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
ASN 17PRO 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8IHK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
R
25 28Right-handed 310
Helix 2
AA2
R
29 55Right-handed alpha
Helix 3
AA3
R
60 78Right-handed alpha
Helix 4
AA4
R
79 89Right-handed alpha
Helix 5
AA5
R
98 128Right-handed alpha
Helix 6
AA6
R
134 139Right-handed 310
Helix 7
AA7
R
140 158Right-handed alpha
Helix 8
AA8
R
160 165Right-handed alpha
Helix 9
AA9
R
187 218Right-handed alpha
Helix 10
AB1
R
225 260Right-handed alpha
Helix 11
AB2
R
267 280Right-handed alpha
Helix 12
AB3
R
282 294Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8IHK.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
169 171first strand
Strand 2
R
174 176anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il