Analysis of interatomic Contacts of Structural Units in PDB entry:
8IJY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IJY entry

There is 1 chain in PDB entry 8IJY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2TRP 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 8IJY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 22Right-handed alpha
Helix 2
AA2
A
23 27Right-handed 310
Helix 3
AA3
A
37 41Right-handed alpha
Helix 4
AA4
A
46 67Right-handed alpha
Helix 5
AA5
A
79 91Right-handed alpha
Helix 6
AA6
A
105 113Right-handed alpha
Helix 7
AA7
A
130 139Right-handed alpha
Helix 8
AA8
A
145 157Right-handed alpha
Helix 9
AA9
A
174 178Right-handed 310
Helix 10
AB1
A
197 209Right-handed alpha
Helix 11
AB2
A
226 241Right-handed alpha
Helix 12
AB3
A
242 245Right-handed 310
Helix 13
AB4
A
264 270Right-handed alpha
Helix 14
AB5
A
274 288Right-handed alpha
Helix 15
AB6
A
292 305Right-handed alpha
Helix 16
AB7
A
305 317Right-handed alpha
Helix 17
AB8
A
320 324Right-handed 310
Helix 18
AB9
A
335 340Right-handed alpha
Helix 19
AC1
A
344 358Right-handed alpha
Helix 20
AC2
A
361 368Right-handed alpha
Helix 21
AC3
A
368 376Right-handed alpha
Helix 22
AC4
A
379 391Right-handed alpha
Helix 23
AC5
A
395 405Right-handed alpha
Helix 24
AC6
A
423 431Right-handed alpha
Helix 25
AC7
A
432 437Right-handed 310
Helix 26
AC8
A
450 463Right-handed alpha
Helix 27
AC9
A
463 471Right-handed alpha
Helix 28
AD1
A
473 482Right-handed alpha
Helix 29
AD2
A
484 502Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8IJY.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 77first strand
Strand 2
A
29 36parallel
Strand 3
A
3 6parallel
Strand 4
A
95 99parallel
Strand 5
A
118 122parallel
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