Analysis of interatomic Contacts of Structural Units in PDB entry:
8ILV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ILV entry

There are 2 chains in PDB entry 8ILV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 7GLY 1050
B
 ASN 323LEU 598
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8ILV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 54Right-handed alpha
Helix 2
AA2
A
58 62Right-handed 310
Helix 3
AA3
A
64 68Right-handed 310
Helix 4
AA4
A
89 93Right-handed 310
Helix 5
AA5
A
107 122Right-handed alpha
Helix 6
AA6
A
124 130Right-handed 310
Helix 7
AA7
A
133 143Right-handed alpha
Helix 8
AA8
A
143 157Right-handed alpha
Helix 9
AA9
A
158 167Right-handed alpha
Helix 10
AB1
A
178 183Right-handed alpha
Helix 11
AB2
A
184 187Right-handed 310
Helix 12
AB3
A
216 229Right-handed alpha
Helix 13
AB4
A
266 269Right-handed 310
Helix 14
AB5
A
270 279Right-handed alpha
Helix 15
AB6
A
290 297Right-handed alpha
Helix 16
AB7
A
305 310Right-handed alpha
Helix 17
AB8
A
328 330Right-handed 310
Helix 18
AB9
A
394 396Right-handed 310
Helix 19
AC1
A
488 496Right-handed alpha
Helix 20
AC2
A
526 536Right-handed alpha
Helix 21
AC3
A
544 554Right-handed alpha
Helix 22
AC4
A
561 563Right-handed 310
Helix 23
AC5
A
564 570Right-handed alpha
Helix 24
AC6
A
576 589Right-handed alpha
Helix 25
AC7
A
594 599Right-handed alpha
Helix 26
AC8
A
600 603Right-handed 310
Helix 27
AC9
A
608 623Right-handed alpha
Helix 28
AD1
A
624 631Right-handed alpha
Helix 29
AD2
A
631 638Right-handed alpha
Helix 30
AD3
A
649 658Right-handed alpha
Helix 31
AD4
A
660 674Right-handed alpha
Helix 32
AD5
A
680 695Right-handed alpha
Helix 33
AD6
A
697 721Right-handed alpha
Helix 34
AD7
A
727 741Right-handed alpha
Helix 35
AD8
A
741 748Right-handed alpha
Helix 36
AD9
A
807 828Right-handed alpha
Helix 37
AE1
A
857 861Right-handed alpha
Helix 38
AE2
A
875 884Right-handed alpha
Helix 39
AE3
A
885 886Right-handed 310
Helix 40
AE4
A
887 888Right-handed 310
Helix 41
AE5
A
889 912Right-handed alpha
Helix 42
AE6
A
957 965Right-handed alpha
Helix 43
AE7
A
974 994Right-handed alpha
Helix 44
AE8
A
994 1003Right-handed alpha
Helix 45
AE9
A
1018 1020Right-handed 310
Helix 46
AF1
A
1021 1026Right-handed alpha
Helix 47
AF2
A
1031 1048Right-handed alpha
Helix 48
AF3
B
327 331Right-handed 310
Helix 49
AF4
B
339 345Right-handed alpha
Helix 50
AF5
B
400 410Right-handed alpha
Helix 51
AF6
B
430 437Right-handed alpha
Helix 52
AF7
B
441 505Right-handed alpha
Helix 53
AF8
B
505 510Right-handed alpha
Helix 54
AF9
B
524 585Right-handed alpha
Helix 55
AG1
B
590 598Right-handed alpha
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There are 11 sheets in PDB entry 8ILV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
20 25anti-parallel
Strand 3
A
99 102parallel
Strand 4
A
69 71anti-parallel
Strand 5
A
81 82anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 212first strand
Strand 2
A
189 194anti-parallel
Strand 3
A
284 285parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 251first strand
Strand 2
A
288 289anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 326first strand
Strand 2
A
483 485parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 392first strand
Strand 2
A
333 341anti-parallel
Strand 3
A
472 477anti-parallel
Strand 4
A
441 444anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
359 362anti-parallel
Strand 3
A
402 409anti-parallel
Strand 4
A
353 356anti-parallel
Strand 5
A
376 377anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
359 362anti-parallel
Strand 3
A
402 409anti-parallel
Strand 4
A
419 427anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
751 753first strand
Strand 2
A
756 761anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 771first strand
Strand 2
A
779 783anti-parallel
Strand 3
A
799 803anti-parallel
Strand 4
A
845 849anti-parallel
Strand 5
A
838 840anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
855 856first strand
Strand 2
A
921 923anti-parallel
Strand 3
A
929 931anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 358first strand
Strand 2
B
369 374anti-parallel
Strand 3
B
377 381anti-parallel
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