Analysis of interatomic Contacts of Structural Units in PDB entry:
8IM0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IM0 entry

There are 3 chains in PDB entry 8IM0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 6PHE 65
A
 SER 138SER 291
B
 ALA 2ARG 125
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 8IM0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 65Right-handed 310
Helix 2
AA2
A
150 155Right-handed alpha
Helix 3
AA3
B
30 34Right-handed 310
Helix 4
AA4
B
63 66Right-handed 310
Helix 5
AA5
B
75 77Right-handed 310
Helix 6
AA6
B
88 92Right-handed 310
Helix 7
AA7
B
106 110Right-handed 310
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There are 4 sheets in PDB entry 8IM0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 212first strand
Strand 2
A
225 236anti-parallel
Strand 3
A
241 252anti-parallel
Strand 4
A
160 168anti-parallel
Strand 5
A
173 183anti-parallel
Strand 6
A
186 196anti-parallel
Strand 7
A
12 22parallel
Strand 8
A
25 36anti-parallel
Strand 9
A
41 50anti-parallel
Strand 10
A
279 289anti-parallel
Strand 11
A
262 273anti-parallel
Strand 12
A
215 222anti-parallel
Strand 13
A
225 236anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 9first strand
Strand 2
B
20 27anti-parallel
Strand 3
B
79 84anti-parallel
Strand 4
B
69 74anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 15first strand
Strand 2
B
117 122parallel
Strand 3
B
93 100anti-parallel
Strand 4
B
35 41anti-parallel
Strand 5
B
48 53anti-parallel
Strand 6
B
59 61anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 15first strand
Strand 2
B
117 122parallel
Strand 3
B
93 100anti-parallel
Strand 4
B
112 113anti-parallel
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