Analysis of interatomic Contacts of Structural Units in PDB entry:
8IMO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IMO entry

There are 40 chains in PDB entry 8IMO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
5
 PRO 47ASP 748
A
 SER 2SER 163
B
 MET 1SER 163
C
 SER 2SER 163
D
 SER 2SER 163
E
 SER 2SER 163
F
 SER 2SER 163
G
 MET 1ALA 172
H
 MET 1ALA 172
I
 MET 1ALA 172
J
 MET 1ALA 172
K
 MET 1ALA 172
L
 MET 1ALA 172
M
 ALA 10SER 78
N
 SER 2SER 163
O
 MET 1SER 163
P
 SER 2SER 163
Q
 SER 2SER 163
R
 SER 2SER 163
S
 SER 2SER 163
T
 MET 1ALA 172
U
 MET 1ALA 172
V
 MET 1ALA 172
W
 MET 1ALA 172
X
 MET 1ALA 172
Y
 MET 1ALA 172
Z
 ALA 10SER 78
a
 SER 2SER 163
b
 MET 1SER 163
c
 SER 2SER 163
d
 SER 2SER 163
e
 SER 2SER 163
f
 SER 2SER 163
g
 MET 1ALA 172
h
 MET 1ALA 172
i
 MET 1ALA 172
j
 MET 1ALA 172
k
 MET 1ALA 172
l
 MET 1ALA 172
m
 ALA 10SER 78
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are361 helices in PDB entry 8IMO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
5
47 56Right-handed alpha
Helix 2
AA2
5
66 75Right-handed alpha
Helix 3
AA3
5
76 86Right-handed alpha
Helix 4
AA4
5
96 102Right-handed alpha
Helix 5
AA5
5
105 110Right-handed alpha
Helix 6
AA6
5
121 135Right-handed alpha
Helix 7
AA7
5
147 157Right-handed alpha
Helix 8
AA8
5
160 170Right-handed alpha
Helix 9
AA9
5
171 179Right-handed alpha
Helix 10
AB1
5
183 196Right-handed alpha
Helix 11
AB2
5
202 217Right-handed alpha
Helix 12
AB3
5
217 227Right-handed alpha
Helix 13
AB4
5
228 235Right-handed alpha
Helix 14
AB5
5
254 265Right-handed alpha
Helix 15
AB6
5
283 289Right-handed alpha
Helix 16
AB7
5
304 315Right-handed alpha
Helix 17
AB8
5
331 336Right-handed alpha
Helix 18
AB9
5
337 342Right-handed alpha
Helix 19
AC1
5
356 368Right-handed alpha
Helix 20
AC2
5
380 389Right-handed alpha
Helix 21
AC3
5
393 403Right-handed alpha
Helix 22
AC4
5
404 412Right-handed alpha
Helix 23
AC5
5
416 429Right-handed alpha
Helix 24
AC6
5
435 460Right-handed alpha
Helix 25
AC7
5
461 468Right-handed alpha
Helix 26
AC8
5
486 497Right-handed alpha
Helix 27
AC9
5
516 522Right-handed alpha
Helix 28
AD1
5
523 526Right-handed 310
Helix 29
AD2
5
528 542Right-handed alpha
Helix 30
AD3
5
551 557Right-handed alpha
Helix 31
AD4
5
560 565Right-handed alpha
Helix 32
AD5
5
575 591Right-handed alpha
Helix 33
AD6
5
597 601Right-handed 310
Helix 34
AD7
5
602 612Right-handed alpha
Helix 35
AD8
5
615 625Right-handed alpha
Helix 36
AD9
5
626 633Right-handed alpha
Helix 37
AE1
5
638 652Right-handed alpha
Helix 38
AE2
5
657 683Right-handed alpha
Helix 39
AE3
5
683 690Right-handed alpha
Helix 40
AE4
5
708 720Right-handed alpha
Helix 41
AE5
5
738 747Right-handed alpha
Helix 42
AE6
A
4 15Right-handed alpha
Helix 43
AE7
A
21 47Right-handed alpha
Helix 44
AE8
A
48 64Right-handed alpha
Helix 45
AE9
A
64 69Right-handed alpha
Helix 46
AF1
A
76 101Right-handed alpha
Helix 47
AF2
A
103 110Right-handed alpha
Helix 48
AF3
A
113 121Right-handed alpha
Helix 49
AF4
A
124 143Right-handed alpha
Helix 50
AF5
A
144 163Right-handed alpha
Helix 51
AF6
B
4 17Right-handed alpha
Helix 52
AF7
B
21 47Right-handed alpha
Helix 53
AF8
B
48 64Right-handed alpha
Helix 54
AF9
B
65 68Right-handed 310
Helix 55
AG1
B
75 100Right-handed alpha
Helix 56
AG2
B
103 110Right-handed alpha
Helix 57
AG3
B
113 121Right-handed alpha
Helix 58
AG4
B
124 143Right-handed alpha
Helix 59
AG5
B
145 163Right-handed alpha
Helix 60
AG6
C
4 16Right-handed alpha
Helix 61
AG7
C
21 34Right-handed alpha
Helix 62
AG8
C
34 45Right-handed alpha
Helix 63
AG9
C
48 64Right-handed alpha
Helix 64
AH1
C
65 68Right-handed 310
Helix 65
AH2
C
76 101Right-handed alpha
Helix 66
AH3
C
103 108Right-handed alpha
Helix 67
AH4
C
113 121Right-handed alpha
Helix 68
AH5
C
124 143Right-handed alpha
Helix 69
AH6
C
145 163Right-handed alpha
Helix 70
AH7
D
4 16Right-handed alpha
Helix 71
AH8
D
21 48Right-handed alpha
Helix 72
AH9
D
48 64Right-handed alpha
Helix 73
AI1
D
65 69Right-handed 310
Helix 74
AI2
D
76 100Right-handed alpha
Helix 75
AI3
D
103 110Right-handed alpha
Helix 76
AI4
D
113 122Right-handed alpha
Helix 77
AI5
D
124 143Right-handed alpha
Helix 78
AI6
D
145 163Right-handed alpha
Helix 79
AI7
E
4 16Right-handed alpha
Helix 80
AI8
E
21 48Right-handed alpha
Helix 81
AI9
E
48 64Right-handed alpha
Helix 82
AJ1
E
65 69Right-handed 310
Helix 83
AJ2
E
76 101Right-handed alpha
Helix 84
AJ3
E
103 110Right-handed alpha
Helix 85
AJ4
E
113 121Right-handed alpha
Helix 86
AJ5
E
124 143Right-handed alpha
Helix 87
AJ6
E
145 163Right-handed alpha
Helix 88
AJ7
F
4 16Right-handed alpha
Helix 89
AJ8
F
21 34Right-handed alpha
Helix 90
AJ9
F
34 48Right-handed alpha
Helix 91
AK1
F
48 64Right-handed alpha
Helix 92
AK2
F
64 69Right-handed alpha
Helix 93
AK3
F
76 100Right-handed alpha
Helix 94
AK4
F
103 110Right-handed alpha
Helix 95
AK5
F
113 122Right-handed alpha
Helix 96
AK6
F
124 143Right-handed alpha
Helix 97
AK7
F
145 163Right-handed alpha
Helix 98
AK8
G
3 16Right-handed alpha
Helix 99
AK9
G
20 63Right-handed alpha
Helix 100
AL1
G
75 100Right-handed alpha
Helix 101
AL2
G
102 121Right-handed alpha
Helix 102
AL3
G
123 143Right-handed alpha
Helix 103
AL4
G
153 172Right-handed alpha
Helix 104
AL5
H
3 16Right-handed alpha
Helix 105
AL6
H
20 33Right-handed alpha
Helix 106
AL7
H
33 47Right-handed alpha
Helix 107
AL8
H
47 63Right-handed alpha
Helix 108
AL9
H
77 100Right-handed alpha
Helix 109
AM1
H
102 108Right-handed alpha
Helix 110
AM2
H
112 121Right-handed alpha
Helix 111
AM3
H
123 144Right-handed alpha
Helix 112
AM4
H
153 172Right-handed alpha
Helix 113
AM5
I
3 16Right-handed alpha
Helix 114
AM6
I
20 33Right-handed alpha
Helix 115
AM7
I
33 47Right-handed alpha
Helix 116
AM8
I
47 63Right-handed alpha
Helix 117
AM9
I
64 67Right-handed 310
Helix 118
AN1
I
75 100Right-handed alpha
Helix 119
AN2
I
102 109Right-handed alpha
Helix 120
AN3
I
112 121Right-handed alpha
Helix 121
AN4
I
123 143Right-handed alpha
Helix 122
AN5
I
153 172Right-handed alpha
Helix 123
AN6
J
3 15Right-handed alpha
Helix 124
AN7
J
20 33Right-handed alpha
Helix 125
AN8
J
33 47Right-handed alpha
Helix 126
AN9
J
47 63Right-handed alpha
Helix 127
AO1
J
63 68Right-handed alpha
Helix 128
AO2
J
77 100Right-handed alpha
Helix 129
AO3
J
102 109Right-handed alpha
Helix 130
AO4
J
112 120Right-handed alpha
Helix 131
AO5
J
123 143Right-handed alpha
Helix 132
AO6
J
153 172Right-handed alpha
Helix 133
AO7
K
3 16Right-handed alpha
Helix 134
AO8
K
20 63Right-handed alpha
Helix 135
AO9
K
64 67Right-handed 310
Helix 136
AP1
K
75 100Right-handed alpha
Helix 137
AP2
K
102 109Right-handed alpha
Helix 138
AP3
K
112 120Right-handed alpha
Helix 139
AP4
K
123 143Right-handed alpha
Helix 140
AP5
K
153 172Right-handed alpha
Helix 141
AP6
L
3 15Right-handed alpha
Helix 142
AP7
L
20 33Right-handed alpha
Helix 143
AP8
L
33 47Right-handed alpha
Helix 144
AP9
L
47 63Right-handed alpha
Helix 145
AQ1
L
64 68Right-handed 310
Helix 146
AQ2
L
75 100Right-handed alpha
Helix 147
AQ3
L
102 108Right-handed alpha
Helix 148
AQ4
L
112 121Right-handed alpha
Helix 149
AQ5
L
123 143Right-handed alpha
Helix 150
AQ6
L
153 172Right-handed alpha
Helix 151
AQ7
M
12 16Right-handed 310
Helix 152
AQ8
M
29 37Right-handed alpha
Helix 153
AQ9
M
52 54Right-handed 310
Helix 154
AR1
M
55 67Right-handed alpha
Helix 155
AR2
N
4 16Right-handed alpha
Helix 156
AR3
N
21 48Right-handed alpha
Helix 157
AR4
N
48 64Right-handed alpha
Helix 158
AR5
N
65 68Right-handed 310
Helix 159
AR6
N
76 101Right-handed alpha
Helix 160
AR7
N
103 110Right-handed alpha
Helix 161
AR8
N
113 121Right-handed alpha
Helix 162
AR9
N
125 143Right-handed alpha
Helix 163
AS1
N
145 163Right-handed alpha
Helix 164
AS2
O
4 16Right-handed alpha
Helix 165
AS3
O
21 48Right-handed alpha
Helix 166
AS4
O
48 64Right-handed alpha
Helix 167
AS5
O
64 69Right-handed alpha
Helix 168
AS6
O
76 101Right-handed alpha
Helix 169
AS7
O
103 110Right-handed alpha
Helix 170
AS8
O
113 121Right-handed alpha
Helix 171
AS9
O
124 143Right-handed alpha
Helix 172
AT1
O
144 163Right-handed alpha
Helix 173
AT2
P
4 15Right-handed alpha
Helix 174
AT3
P
21 48Right-handed alpha
Helix 175
AT4
P
48 64Right-handed alpha
Helix 176
AT5
P
64 69Right-handed alpha
Helix 177
AT6
P
76 101Right-handed alpha
Helix 178
AT7
P
103 110Right-handed alpha
Helix 179
AT8
P
113 121Right-handed alpha
Helix 180
AT9
P
125 143Right-handed alpha
Helix 181
AU1
P
145 163Right-handed alpha
Helix 182
AU2
Q
4 16Right-handed alpha
Helix 183
AU3
Q
21 48Right-handed alpha
Helix 184
AU4
Q
48 64Right-handed alpha
Helix 185
AU5
Q
65 68Right-handed 310
Helix 186
AU6
Q
76 101Right-handed alpha
Helix 187
AU7
Q
103 110Right-handed alpha
Helix 188
AU8
Q
113 121Right-handed alpha
Helix 189
AU9
Q
124 143Right-handed alpha
Helix 190
AV1
Q
145 163Right-handed alpha
Helix 191
AV2
R
4 16Right-handed alpha
Helix 192
AV3
R
21 48Right-handed alpha
Helix 193
AV4
R
48 64Right-handed alpha
Helix 194
AV5
R
64 69Right-handed alpha
Helix 195
AV6
R
76 101Right-handed alpha
Helix 196
AV7
R
103 110Right-handed alpha
Helix 197
AV8
R
113 121Right-handed alpha
Helix 198
AV9
R
124 143Right-handed alpha
Helix 199
AW1
R
144 163Right-handed alpha
Helix 200
AW2
S
4 15Right-handed alpha
Helix 201
AW3
S
21 48Right-handed alpha
Helix 202
AW4
S
48 64Right-handed alpha
Helix 203
AW5
S
65 68Right-handed 310
Helix 204
AW6
S
76 100Right-handed alpha
Helix 205
AW7
S
103 110Right-handed alpha
Helix 206
AW8
S
114 121Right-handed alpha
Helix 207
AW9
S
124 143Right-handed alpha
Helix 208
AX1
S
145 163Right-handed alpha
Helix 209
AX2
T
3 16Right-handed alpha
Helix 210
AX3
T
20 33Right-handed alpha
Helix 211
AX4
T
33 63Right-handed alpha
Helix 212
AX5
T
75 100Right-handed alpha
Helix 213
AX6
T
102 121Right-handed alpha
Helix 214
AX7
T
123 143Right-handed alpha
Helix 215
AX8
T
153 172Right-handed alpha
Helix 216
AX9
U
3 16Right-handed alpha
Helix 217
AY1
U
20 47Right-handed alpha
Helix 218
AY2
U
47 63Right-handed alpha
Helix 219
AY3
U
77 100Right-handed alpha
Helix 220
AY4
U
102 108Right-handed alpha
Helix 221
AY5
U
109 121Right-handed alpha
Helix 222
AY6
U
123 144Right-handed alpha
Helix 223
AY7
U
153 172Right-handed alpha
Helix 224
AY8
V
3 16Right-handed alpha
Helix 225
AY9
V
20 33Right-handed alpha
Helix 226
AZ1
V
33 47Right-handed alpha
Helix 227
AZ2
V
47 63Right-handed alpha
Helix 228
AZ3
V
75 100Right-handed alpha
Helix 229
AZ4
V
102 108Right-handed alpha
Helix 230
AZ5
V
112 121Right-handed alpha
Helix 231
AZ6
V
123 144Right-handed alpha
Helix 232
AZ7
V
153 172Right-handed alpha
Helix 233
AZ8
W
3 15Right-handed alpha
Helix 234
AZ9
W
20 33Right-handed alpha
Helix 235
BA1
W
33 47Right-handed alpha
Helix 236
BA2
W
47 63Right-handed alpha
Helix 237
BA3
W
64 68Right-handed 310
Helix 238
BA4
W
77 100Right-handed alpha
Helix 239
BA5
W
102 109Right-handed alpha
Helix 240
BA6
W
113 121Right-handed alpha
Helix 241
BA7
W
123 143Right-handed alpha
Helix 242
BA8
W
153 172Right-handed alpha
Helix 243
BA9
X
3 16Right-handed alpha
Helix 244
BB1
X
20 33Right-handed alpha
Helix 245
BB2
X
33 63Right-handed alpha
Helix 246
BB3
X
64 67Right-handed 310
Helix 247
BB4
X
75 100Right-handed alpha
Helix 248
BB5
X
102 109Right-handed alpha
Helix 249
BB6
X
112 120Right-handed alpha
Helix 250
BB7
X
123 143Right-handed alpha
Helix 251
BB8
X
153 172Right-handed alpha
Helix 252
BB9
Y
3 15Right-handed alpha
Helix 253
BC1
Y
20 47Right-handed alpha
Helix 254
BC2
Y
47 63Right-handed alpha
Helix 255
BC3
Y
75 100Right-handed alpha
Helix 256
BC4
Y
102 108Right-handed alpha
Helix 257
BC5
Y
112 121Right-handed alpha
Helix 258
BC6
Y
123 143Right-handed alpha
Helix 259
BC7
Y
153 172Right-handed alpha
Helix 260
BC8
Z
12 16Right-handed 310
Helix 261
BC9
Z
26 37Right-handed alpha
Helix 262
BD1
Z
55 67Right-handed alpha
Helix 263
BD2
a
4 16Right-handed alpha
Helix 264
BD3
a
21 48Right-handed alpha
Helix 265
BD4
a
48 64Right-handed alpha
Helix 266
BD5
a
64 69Right-handed alpha
Helix 267
BD6
a
76 101Right-handed alpha
Helix 268
BD7
a
103 110Right-handed alpha
Helix 269
BD8
a
113 122Right-handed alpha
Helix 270
BD9
a
124 143Right-handed alpha
Helix 271
BE1
a
144 163Right-handed alpha
Helix 272
BE2
b
4 16Right-handed alpha
Helix 273
BE3
b
21 48Right-handed alpha
Helix 274
BE4
b
48 64Right-handed alpha
Helix 275
BE5
b
65 69Right-handed 310
Helix 276
BE6
b
76 101Right-handed alpha
Helix 277
BE7
b
103 110Right-handed alpha
Helix 278
BE8
b
113 122Right-handed alpha
Helix 279
BE9
b
124 143Right-handed alpha
Helix 280
BF1
b
144 163Right-handed alpha
Helix 281
BF2
c
4 17Right-handed alpha
Helix 282
BF3
c
21 34Right-handed alpha
Helix 283
BF4
c
34 48Right-handed alpha
Helix 284
BF5
c
48 64Right-handed alpha
Helix 285
BF6
c
76 101Right-handed alpha
Helix 286
BF7
c
103 110Right-handed alpha
Helix 287
BF8
c
113 121Right-handed alpha
Helix 288
BF9
c
124 143Right-handed alpha
Helix 289
BG1
c
145 163Right-handed alpha
Helix 290
BG2
d
4 16Right-handed alpha
Helix 291
BG3
d
21 48Right-handed alpha
Helix 292
BG4
d
48 64Right-handed alpha
Helix 293
BG5
d
65 69Right-handed 310
Helix 294
BG6
d
76 101Right-handed alpha
Helix 295
BG7
d
103 110Right-handed alpha
Helix 296
BG8
d
113 121Right-handed alpha
Helix 297
BG9
d
124 143Right-handed alpha
Helix 298
BH1
d
144 163Right-handed alpha
Helix 299
BH2
e
4 17Right-handed alpha
Helix 300
BH3
e
21 64Right-handed alpha
Helix 301
BH4
e
65 68Right-handed 310
Helix 302
BH5
e
76 101Right-handed alpha
Helix 303
BH6
e
103 111Right-handed alpha
Helix 304
BH7
e
113 119Right-handed alpha
Helix 305
BH8
e
124 143Right-handed alpha
Helix 306
BH9
e
144 163Right-handed alpha
Helix 307
BI1
f
4 15Right-handed alpha
Helix 308
BI2
f
21 48Right-handed alpha
Helix 309
BI3
f
48 64Right-handed alpha
Helix 310
BI4
f
76 101Right-handed alpha
Helix 311
BI5
f
103 110Right-handed alpha
Helix 312
BI6
f
113 122Right-handed alpha
Helix 313
BI7
f
124 143Right-handed alpha
Helix 314
BI8
f
144 163Right-handed alpha
Helix 315
BI9
g
3 16Right-handed alpha
Helix 316
BJ1
g
20 33Right-handed alpha
Helix 317
BJ2
g
33 63Right-handed alpha
Helix 318
BJ3
g
75 100Right-handed alpha
Helix 319
BJ4
g
102 121Right-handed alpha
Helix 320
BJ5
g
123 144Right-handed alpha
Helix 321
BJ6
g
153 172Right-handed alpha
Helix 322
BJ7
h
3 15Right-handed alpha
Helix 323
BJ8
h
20 63Right-handed alpha
Helix 324
BJ9
h
77 100Right-handed alpha
Helix 325
BK1
h
102 108Right-handed alpha
Helix 326
BK2
h
112 121Right-handed alpha
Helix 327
BK3
h
123 144Right-handed alpha
Helix 328
BK4
h
153 172Right-handed alpha
Helix 329
BK5
i
3 16Right-handed alpha
Helix 330
BK6
i
20 63Right-handed alpha
Helix 331
BK7
i
75 100Right-handed alpha
Helix 332
BK8
i
102 109Right-handed alpha
Helix 333
BK9
i
112 121Right-handed alpha
Helix 334
BL1
i
123 143Right-handed alpha
Helix 335
BL2
i
153 172Right-handed alpha
Helix 336
BL3
j
3 16Right-handed alpha
Helix 337
BL4
j
20 63Right-handed alpha
Helix 338
BL5
j
76 100Right-handed alpha
Helix 339
BL6
j
102 109Right-handed alpha
Helix 340
BL7
j
112 121Right-handed alpha
Helix 341
BL8
j
123 144Right-handed alpha
Helix 342
BL9
j
153 172Right-handed alpha
Helix 343
BM1
k
3 15Right-handed alpha
Helix 344
BM2
k
20 33Right-handed alpha
Helix 345
BM3
k
33 47Right-handed alpha
Helix 346
BM4
k
47 63Right-handed alpha
Helix 347
BM5
k
75 100Right-handed alpha
Helix 348
BM6
k
102 110Right-handed alpha
Helix 349
BM7
k
112 121Right-handed alpha
Helix 350
BM8
k
123 143Right-handed alpha
Helix 351
BM9
k
153 172Right-handed alpha
Helix 352
BN1
l
3 16Right-handed alpha
Helix 353
BN2
l
20 47Right-handed alpha
Helix 354
BN3
l
47 63Right-handed alpha
Helix 355
BN4
l
75 100Right-handed alpha
Helix 356
BN5
l
102 108Right-handed alpha
Helix 357
BN6
l
112 120Right-handed alpha
Helix 358
BN7
l
123 143Right-handed alpha
Helix 359
BN8
l
153 172Right-handed alpha
Helix 360
BN9
m
26 37Right-handed alpha
Helix 361
BO1
m
55 66Right-handed alpha
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There are 3 sheets in PDB entry 8IMO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
47 51first strand
Strand 2
M
19 24anti-parallel
Strand 3
M
69 75anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Z
46 51first strand
Strand 2
Z
19 24anti-parallel
Strand 3
Z
69 75anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
m
46 51first strand
Strand 2
m
19 24anti-parallel
Strand 3
m
69 75anti-parallel
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