Analysis of interatomic Contacts of Structural Units in PDB entry:
8IMU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IMU entry

There are 2 chains in PDB entry 8IMU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4GLU 574
B
 SER 4GLU 574
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8IMU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 28Right-handed alpha
Helix 2
AA2
A
29 31Right-handed 310
Helix 3
AA3
A
32 42Right-handed alpha
Helix 4
AA4
A
47 51Right-handed 310
Helix 5
AA5
A
69 84Right-handed alpha
Helix 6
AA6
A
97 102Right-handed alpha
Helix 7
AA7
A
104 108Right-handed 310
Helix 8
AA8
A
109 129Right-handed alpha
Helix 9
AA9
A
143 154Right-handed alpha
Helix 10
AB1
A
215 227Right-handed alpha
Helix 11
AB2
A
241 262Right-handed alpha
Helix 12
AB3
A
264 269Right-handed alpha
Helix 13
AB4
A
270 285Right-handed alpha
Helix 14
AB5
A
288 301Right-handed alpha
Helix 15
AB6
A
306 317Right-handed alpha
Helix 16
AB7
A
330 337Right-handed alpha
Helix 17
AB8
A
338 350Right-handed alpha
Helix 18
AB9
A
364 372Right-handed alpha
Helix 19
AC1
A
428 439Right-handed alpha
Helix 20
AC2
A
440 444Right-handed 310
Helix 21
AC3
A
465 474Right-handed alpha
Helix 22
AC4
A
503 507Right-handed 310
Helix 23
AC5
A
508 513Right-handed 310
Helix 24
AC6
A
533 543Right-handed alpha
Helix 25
AC7
A
553 563Right-handed alpha
Helix 26
AC8
A
565 569Right-handed 310
Helix 27
AC9
B
23 28Right-handed alpha
Helix 28
AD1
B
29 31Right-handed 310
Helix 29
AD2
B
32 42Right-handed alpha
Helix 30
AD3
B
47 51Right-handed 310
Helix 31
AD4
B
69 84Right-handed alpha
Helix 32
AD5
B
97 102Right-handed alpha
Helix 33
AD6
B
104 110Right-handed 310
Helix 34
AD7
B
111 129Right-handed alpha
Helix 35
AD8
B
143 154Right-handed alpha
Helix 36
AD9
B
215 227Right-handed alpha
Helix 37
AE1
B
241 262Right-handed alpha
Helix 38
AE2
B
264 269Right-handed alpha
Helix 39
AE3
B
270 285Right-handed alpha
Helix 40
AE4
B
288 301Right-handed alpha
Helix 41
AE5
B
306 317Right-handed alpha
Helix 42
AE6
B
330 337Right-handed alpha
Helix 43
AE7
B
338 350Right-handed alpha
Helix 44
AE8
B
364 372Right-handed alpha
Helix 45
AE9
B
428 439Right-handed alpha
Helix 46
AF1
B
440 444Right-handed 310
Helix 47
AF2
B
465 474Right-handed alpha
Helix 48
AF3
B
503 507Right-handed 310
Helix 49
AF4
B
508 513Right-handed 310
Helix 50
AF5
B
533 544Right-handed alpha
Helix 51
AF6
B
553 563Right-handed alpha
Helix 52
AF7
B
565 569Right-handed 310
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There are 6 sheets in PDB entry 8IMU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 92first strand
Strand 2
A
53 58parallel
Strand 3
A
132 136parallel
Strand 4
A
157 159parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 397first strand
Strand 2
A
406 410anti-parallel
Strand 3
A
496 501anti-parallel
Strand 4
A
481 484parallel
Strand 5
A
447 450parallel
Strand 6
A
418 426parallel
Strand 7
A
518 522anti-parallel
Strand 8
A
527 530anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 464first strand
Strand 2
A
487 488parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 92first strand
Strand 2
B
53 58parallel
Strand 3
B
132 136parallel
Strand 4
B
157 159parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
395 397first strand
Strand 2
B
408 410anti-parallel
Strand 3
B
496 498anti-parallel
Strand 4
B
481 484parallel
Strand 5
B
447 450parallel
Strand 6
B
418 426parallel
Strand 7
B
518 522anti-parallel
Strand 8
B
527 530anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
463 464first strand
Strand 2
B
487 488parallel
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