Analysis of interatomic Contacts of Structural Units in PDB entry:
8IMZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8IMZ entry

There are 6 chains in PDB entry 8IMZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 784	GLU 2547
D	CYS 227	SER 247
E	CYS 227	SER 247
C	LEU 784	GLU 2547
B	LEU 784	GLU 2547
F	CYS 227	SER 247

There are159 helices in PDB entry 8IMZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	784	824	Right-handed alpha
Helix 2	AA2	A	826	840	Right-handed alpha
Helix 3	AA3	A	842	844	Right-handed 310
Helix 4	AA4	A	845	858	Right-handed alpha
Helix 5	AA5	A	858	868	Right-handed alpha
Helix 6	AA6	A	925	950	Right-handed alpha
Helix 7	AA7	A	973	1006	Right-handed alpha
Helix 8	AA8	A	1009	1023	Right-handed alpha
Helix 9	AA9	A	1025	1053	Right-handed alpha
Helix 10	AB1	A	1073	1080	Right-handed alpha
Helix 11	AB2	A	1093	1114	Right-handed alpha
Helix 12	AB3	A	1148	1159	Right-handed alpha
Helix 13	AB4	A	1161	1176	Right-handed alpha
Helix 14	AB5	A	1180	1199	Right-handed alpha
Helix 15	AB6	A	1202	1228	Right-handed alpha
Helix 16	AB7	A	1229	1232	Right-handed 310
Helix 17	AB8	A	1244	1250	Right-handed alpha
Helix 18	AB9	A	1282	1299	Right-handed alpha
Helix 19	AC1	A	1302	1365	Right-handed alpha
Helix 20	AC2	A	1403	1408	Right-handed alpha
Helix 21	AC3	A	1510	1546	Right-handed alpha
Helix 22	AC4	A	1551	1558	Right-handed alpha
Helix 23	AC5	A	1656	1664	Right-handed alpha
Helix 24	AC6	A	1664	1669	Right-handed alpha
Helix 25	AC7	A	1672	1686	Right-handed alpha
Helix 26	AC8	A	1686	1701	Right-handed alpha
Helix 27	AC9	A	1704	1707	Right-handed 310
Helix 28	AD1	A	1708	1717	Right-handed alpha
Helix 29	AD2	A	1726	1749	Right-handed alpha
Helix 30	AD3	A	1771	1775	Right-handed alpha
Helix 31	AD4	A	1786	1803	Right-handed alpha
Helix 32	AD5	A	1958	1968	Right-handed alpha
Helix 33	AD6	A	1976	1997	Right-handed alpha
Helix 34	AD7	A	2016	2041	Right-handed alpha
Helix 35	AD8	A	2042	2069	Right-handed alpha
Helix 36	AD9	A	2076	2100	Right-handed alpha
Helix 37	AE1	A	2115	2128	Right-handed alpha
Helix 38	AE2	A	2130	2142	Right-handed alpha
Helix 39	AE3	A	2148	2175	Right-handed alpha
Helix 40	AE4	A	2184	2214	Right-handed alpha
Helix 41	AE5	A	2252	2262	Right-handed alpha
Helix 42	AE6	A	2266	2273	Right-handed alpha
Helix 43	AE7	A	2274	2276	Right-handed 310
Helix 44	AE8	A	2277	2279	Right-handed 310
Helix 45	AE9	A	2297	2311	Right-handed alpha
Helix 46	AF1	A	2326	2330	Right-handed 310
Helix 47	AF2	A	2348	2359	Right-handed alpha
Helix 48	AF3	A	2387	2391	Right-handed 310
Helix 49	AF4	A	2466	2483	Right-handed alpha
Helix 50	AF5	A	2500	2516	Right-handed alpha
Helix 51	AF6	A	2519	2533	Right-handed alpha
Helix 52	AF7	A	2537	2542	Right-handed alpha
Helix 53	AF8	D	230	245	Right-handed alpha
Helix 54	AF9	E	230	245	Right-handed alpha
Helix 55	AG1	C	785	824	Right-handed alpha
Helix 56	AG2	C	826	840	Right-handed alpha
Helix 57	AG3	C	842	844	Right-handed 310
Helix 58	AG4	C	845	858	Right-handed alpha
Helix 59	AG5	C	858	868	Right-handed alpha
Helix 60	AG6	C	925	950	Right-handed alpha
Helix 61	AG7	C	973	1006	Right-handed alpha
Helix 62	AG8	C	1009	1023	Right-handed alpha
Helix 63	AG9	C	1025	1053	Right-handed alpha
Helix 64	AH1	C	1073	1080	Right-handed alpha
Helix 65	AH2	C	1093	1114	Right-handed alpha
Helix 66	AH3	C	1148	1159	Right-handed alpha
Helix 67	AH4	C	1161	1176	Right-handed alpha
Helix 68	AH5	C	1180	1199	Right-handed alpha
Helix 69	AH6	C	1202	1228	Right-handed alpha
Helix 70	AH7	C	1229	1232	Right-handed 310
Helix 71	AH8	C	1244	1250	Right-handed alpha
Helix 72	AH9	C	1282	1299	Right-handed alpha
Helix 73	AI1	C	1302	1365	Right-handed alpha
Helix 74	AI2	C	1403	1408	Right-handed alpha
Helix 75	AI3	C	1510	1546	Right-handed alpha
Helix 76	AI4	C	1551	1558	Right-handed alpha
Helix 77	AI5	C	1656	1664	Right-handed alpha
Helix 78	AI6	C	1664	1669	Right-handed alpha
Helix 79	AI7	C	1672	1686	Right-handed alpha
Helix 80	AI8	C	1686	1701	Right-handed alpha
Helix 81	AI9	C	1704	1707	Right-handed 310
Helix 82	AJ1	C	1708	1717	Right-handed alpha
Helix 83	AJ2	C	1726	1749	Right-handed alpha
Helix 84	AJ3	C	1771	1775	Right-handed alpha
Helix 85	AJ4	C	1786	1803	Right-handed alpha
Helix 86	AJ5	C	1958	1968	Right-handed alpha
Helix 87	AJ6	C	1976	1997	Right-handed alpha
Helix 88	AJ7	C	2016	2041	Right-handed alpha
Helix 89	AJ8	C	2042	2069	Right-handed alpha
Helix 90	AJ9	C	2076	2100	Right-handed alpha
Helix 91	AK1	C	2115	2128	Right-handed alpha
Helix 92	AK2	C	2130	2142	Right-handed alpha
Helix 93	AK3	C	2148	2175	Right-handed alpha
Helix 94	AK4	C	2184	2214	Right-handed alpha
Helix 95	AK5	C	2252	2262	Right-handed alpha
Helix 96	AK6	C	2266	2273	Right-handed alpha
Helix 97	AK7	C	2274	2276	Right-handed 310
Helix 98	AK8	C	2277	2279	Right-handed 310
Helix 99	AK9	C	2297	2311	Right-handed alpha
Helix 100	AL1	C	2326	2330	Right-handed 310
Helix 101	AL2	C	2348	2359	Right-handed alpha
Helix 102	AL3	C	2387	2391	Right-handed 310
Helix 103	AL4	C	2466	2483	Right-handed alpha
Helix 104	AL5	C	2500	2516	Right-handed alpha
Helix 105	AL6	C	2519	2533	Right-handed alpha
Helix 106	AL7	C	2537	2542	Right-handed alpha
Helix 107	AL8	B	785	824	Right-handed alpha
Helix 108	AL9	B	826	840	Right-handed alpha
Helix 109	AM1	B	842	844	Right-handed 310
Helix 110	AM2	B	845	858	Right-handed alpha
Helix 111	AM3	B	858	868	Right-handed alpha
Helix 112	AM4	B	925	950	Right-handed alpha
Helix 113	AM5	B	973	1006	Right-handed alpha
Helix 114	AM6	B	1009	1023	Right-handed alpha
Helix 115	AM7	B	1025	1053	Right-handed alpha
Helix 116	AM8	B	1073	1080	Right-handed alpha
Helix 117	AM9	B	1093	1114	Right-handed alpha
Helix 118	AN1	B	1148	1159	Right-handed alpha
Helix 119	AN2	B	1161	1176	Right-handed alpha
Helix 120	AN3	B	1180	1199	Right-handed alpha
Helix 121	AN4	B	1202	1228	Right-handed alpha
Helix 122	AN5	B	1229	1232	Right-handed 310
Helix 123	AN6	B	1244	1250	Right-handed alpha
Helix 124	AN7	B	1282	1299	Right-handed alpha
Helix 125	AN8	B	1302	1365	Right-handed alpha
Helix 126	AN9	B	1403	1408	Right-handed alpha
Helix 127	AO1	B	1510	1546	Right-handed alpha
Helix 128	AO2	B	1551	1558	Right-handed alpha
Helix 129	AO3	B	1656	1664	Right-handed alpha
Helix 130	AO4	B	1664	1669	Right-handed alpha
Helix 131	AO5	B	1672	1686	Right-handed alpha
Helix 132	AO6	B	1686	1701	Right-handed alpha
Helix 133	AO7	B	1704	1707	Right-handed 310
Helix 134	AO8	B	1708	1717	Right-handed alpha
Helix 135	AO9	B	1726	1749	Right-handed alpha
Helix 136	AP1	B	1771	1775	Right-handed alpha
Helix 137	AP2	B	1786	1803	Right-handed alpha
Helix 138	AP3	B	1958	1968	Right-handed alpha
Helix 139	AP4	B	1976	1997	Right-handed alpha
Helix 140	AP5	B	2016	2041	Right-handed alpha
Helix 141	AP6	B	2042	2069	Right-handed alpha
Helix 142	AP7	B	2076	2100	Right-handed alpha
Helix 143	AP8	B	2115	2128	Right-handed alpha
Helix 144	AP9	B	2130	2142	Right-handed alpha
Helix 145	AQ1	B	2148	2175	Right-handed alpha
Helix 146	AQ2	B	2184	2214	Right-handed alpha
Helix 147	AQ3	B	2252	2262	Right-handed alpha
Helix 148	AQ4	B	2266	2273	Right-handed alpha
Helix 149	AQ5	B	2274	2276	Right-handed 310
Helix 150	AQ6	B	2277	2279	Right-handed 310
Helix 151	AQ7	B	2297	2311	Right-handed alpha
Helix 152	AQ8	B	2326	2330	Right-handed 310
Helix 153	AQ9	B	2348	2359	Right-handed alpha
Helix 154	AR1	B	2387	2391	Right-handed 310
Helix 155	AR2	B	2466	2483	Right-handed alpha
Helix 156	AR3	B	2500	2516	Right-handed alpha
Helix 157	AR4	B	2519	2533	Right-handed alpha
Helix 158	AR5	B	2537	2542	Right-handed alpha
Helix 159	AR6	F	230	245	Right-handed alpha

There are 12 sheets in PDB entry 8IMZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2237	2243	first strand
Strand 2	A	2225	2232	anti-parallel
Strand 3	A	2315	2324	anti-parallel
Strand 4	A	2335	2339	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2237	2243	first strand
Strand 2	A	2225	2232	anti-parallel
Strand 3	A	2315	2324	anti-parallel
Strand 4	A	2342	2344	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2248	2250	first strand
Strand 2	A	2281	2284	anti-parallel
Strand 3	A	2447	2450	anti-parallel
Strand 4	A	2375	2378	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2366	2372	first strand
Strand 2	A	2399	2408	anti-parallel
Strand 3	A	2427	2434	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2237	2243	first strand
Strand 2	C	2225	2232	anti-parallel
Strand 3	C	2315	2324	anti-parallel
Strand 4	C	2335	2339	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2237	2243	first strand
Strand 2	C	2225	2232	anti-parallel
Strand 3	C	2315	2324	anti-parallel
Strand 4	C	2342	2344	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2248	2250	first strand
Strand 2	C	2281	2284	anti-parallel
Strand 3	C	2447	2450	anti-parallel
Strand 4	C	2375	2378	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2366	2372	first strand
Strand 2	C	2399	2408	anti-parallel
Strand 3	C	2427	2434	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2237	2243	first strand
Strand 2	B	2225	2232	anti-parallel
Strand 3	B	2315	2324	anti-parallel
Strand 4	B	2335	2339	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2237	2243	first strand
Strand 2	B	2225	2232	anti-parallel
Strand 3	B	2315	2324	anti-parallel
Strand 4	B	2342	2344	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2248	2250	first strand
Strand 2	B	2281	2284	anti-parallel
Strand 3	B	2447	2450	anti-parallel
Strand 4	B	2375	2378	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2366	2372	first strand
Strand 2	B	2399	2408	anti-parallel
Strand 3	B	2427	2434	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8IMZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8IMZ