Analysis of interatomic Contacts of Structural Units in PDB entry:
8IN1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IN1 entry

There are 2 chains in PDB entry 8IN1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 26LYS 977
B
 LEU 26LEU 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 92 helices in PDB entry 8IN1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 47Right-handed alpha
Helix 2
AA2
A
51 55Right-handed 310
Helix 3
AA3
A
58 65Right-handed alpha
Helix 4
AA4
A
66 70Right-handed 310
Helix 5
AA5
A
81 84Right-handed 310
Helix 6
AA6
A
85 97Right-handed alpha
Helix 7
AA7
A
106 111Right-handed alpha
Helix 8
AA8
A
115 119Right-handed 310
Helix 9
AA9
A
120 137Right-handed alpha
Helix 10
AB1
A
151 156Right-handed alpha
Helix 11
AB2
A
157 162Right-handed 310
Helix 12
AB3
A
163 181Right-handed alpha
Helix 13
AB4
A
192 202Right-handed alpha
Helix 14
AB5
A
215 238Right-handed alpha
Helix 15
AB6
A
238 243Right-handed alpha
Helix 16
AB7
A
261 276Right-handed alpha
Helix 17
AB8
A
276 285Right-handed alpha
Helix 18
AB9
A
289 301Right-handed alpha
Helix 19
AC1
A
302 305Right-handed 310
Helix 20
AC2
A
310 318Right-handed alpha
Helix 21
AC3
A
381 395Right-handed alpha
Helix 22
AC4
A
415 435Right-handed alpha
Helix 23
AC5
A
452 459Right-handed 310
Helix 24
AC6
A
478 490Right-handed alpha
Helix 25
AC7
A
494 499Right-handed alpha
Helix 26
AC8
A
526 531Right-handed alpha
Helix 27
AC9
A
542 550Right-handed alpha
Helix 28
AD1
A
553 557Right-handed 310
Helix 29
AD2
A
564 580Right-handed alpha
Helix 30
AD3
A
589 594Right-handed alpha
Helix 31
AD4
A
598 602Right-handed 310
Helix 32
AD5
A
603 620Right-handed alpha
Helix 33
AD6
A
634 640Right-handed alpha
Helix 34
AD7
A
641 646Right-handed 310
Helix 35
AD8
A
647 664Right-handed alpha
Helix 36
AD9
A
675 685Right-handed alpha
Helix 37
AE1
A
698 722Right-handed alpha
Helix 38
AE2
A
722 727Right-handed alpha
Helix 39
AE3
A
745 760Right-handed alpha
Helix 40
AE4
A
760 769Right-handed alpha
Helix 41
AE5
A
775 789Right-handed alpha
Helix 42
AE6
A
800 808Right-handed alpha
Helix 43
AE7
A
837 840Right-handed 310
Helix 44
AE8
A
862 876Right-handed alpha
Helix 45
AE9
A
896 916Right-handed alpha
Helix 46
AF1
A
934 938Right-handed 310
Helix 47
AF2
A
960 973Right-handed alpha
Helix 48
AF3
B
42 47Right-handed alpha
Helix 49
AF4
B
58 64Right-handed alpha
Helix 50
AF5
B
65 70Right-handed 310
Helix 51
AF6
B
81 84Right-handed 310
Helix 52
AF7
B
85 97Right-handed alpha
Helix 53
AF8
B
106 111Right-handed alpha
Helix 54
AF9
B
115 119Right-handed 310
Helix 55
AG1
B
120 137Right-handed alpha
Helix 56
AG2
B
151 157Right-handed alpha
Helix 57
AG3
B
158 163Right-handed 310
Helix 58
AG4
B
164 181Right-handed alpha
Helix 59
AG5
B
192 202Right-handed alpha
Helix 60
AG6
B
215 238Right-handed alpha
Helix 61
AG7
B
238 243Right-handed alpha
Helix 62
AG8
B
261 276Right-handed alpha
Helix 63
AG9
B
276 285Right-handed alpha
Helix 64
AH1
B
289 301Right-handed alpha
Helix 65
AH2
B
302 305Right-handed 310
Helix 66
AH3
B
310 318Right-handed alpha
Helix 67
AH4
B
381 395Right-handed alpha
Helix 68
AH5
B
415 435Right-handed alpha
Helix 69
AH6
B
452 459Right-handed 310
Helix 70
AH7
B
478 491Right-handed alpha
Helix 71
AH8
B
494 500Right-handed alpha
Helix 72
AH9
B
526 531Right-handed alpha
Helix 73
AI1
B
542 549Right-handed alpha
Helix 74
AI2
B
568 580Right-handed alpha
Helix 75
AI3
B
589 594Right-handed alpha
Helix 76
AI4
B
598 602Right-handed 310
Helix 77
AI5
B
603 620Right-handed alpha
Helix 78
AI6
B
634 640Right-handed alpha
Helix 79
AI7
B
641 646Right-handed 310
Helix 80
AI8
B
647 664Right-handed alpha
Helix 81
AI9
B
675 685Right-handed alpha
Helix 82
AJ1
B
698 722Right-handed alpha
Helix 83
AJ2
B
722 727Right-handed alpha
Helix 84
AJ3
B
745 760Right-handed alpha
Helix 85
AJ4
B
760 769Right-handed alpha
Helix 86
AJ5
B
775 789Right-handed alpha
Helix 87
AJ6
B
800 808Right-handed alpha
Helix 88
AJ7
B
837 840Right-handed 310
Helix 89
AJ8
B
862 876Right-handed alpha
Helix 90
AJ9
B
896 916Right-handed alpha
Helix 91
AK1
B
934 941Right-handed 310
Helix 92
AK2
B
960 973Right-handed alpha
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There are 12 sheets in PDB entry 8IN1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
100 104parallel
Strand 3
A
140 146parallel
Strand 4
A
186 191parallel
Strand 5
A
245 251parallel
Strand 6
A
324 327parallel
Strand 7
A
400 405parallel
Strand 8
A
439 445parallel
Strand 9
A
36 40parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 257first strand
Strand 2
A
331 336parallel
Strand 3
A
354 358anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 466first strand
Strand 2
A
475 477anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 524first strand
Strand 2
A
583 587parallel
Strand 3
A
623 627parallel
Strand 4
A
669 674parallel
Strand 5
A
729 735parallel
Strand 6
A
813 817parallel
Strand 7
A
881 885parallel
Strand 8
A
921 926parallel
Strand 9
A
520 524parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
738 741first strand
Strand 2
A
821 826parallel
Strand 3
A
842 844anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
946 948first strand
Strand 2
A
957 959anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 40first strand
Strand 2
B
100 104parallel
Strand 3
B
140 146parallel
Strand 4
B
186 191parallel
Strand 5
B
245 251parallel
Strand 6
B
324 327parallel
Strand 7
B
400 405parallel
Strand 8
B
439 445parallel
Strand 9
B
36 40parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 257first strand
Strand 2
B
331 336parallel
Strand 3
B
354 357anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
464 466first strand
Strand 2
B
475 477anti-parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
520 524first strand
Strand 2
B
583 587parallel
Strand 3
B
623 629parallel
Strand 4
B
669 674parallel
Strand 5
B
729 735parallel
Strand 6
B
813 817parallel
Strand 7
B
881 885parallel
Strand 8
B
921 926parallel
Strand 9
B
520 524parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
738 741first strand
Strand 2
B
821 826parallel
Strand 3
B
842 844anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
946 948first strand
Strand 2
B
957 959anti-parallel
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