Analysis of interatomic Contacts of Structural Units in PDB entry:
8IN2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8IN2 entry

There are 2 chains in PDB entry 8IN2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 6THR 268
B
 ASN 6THR 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8IN2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed 310
Helix 2
AA2
A
26 34Right-handed alpha
Helix 3
AA3
A
34 39Right-handed alpha
Helix 4
AA4
A
77 83Right-handed 310
Helix 5
AA5
A
90 103Right-handed alpha
Helix 6
AA6
A
118 129Right-handed alpha
Helix 7
AA7
A
146 158Right-handed alpha
Helix 8
AA8
A
159 163Right-handed 310
Helix 9
AA9
A
188 204Right-handed alpha
Helix 10
AB1
A
206 212Right-handed alpha
Helix 11
AB2
A
212 217Right-handed alpha
Helix 12
AB3
A
219 224Right-handed alpha
Helix 13
AB4
A
226 229Right-handed 310
Helix 14
AB5
A
230 241Right-handed alpha
Helix 15
AB6
B
17 22Right-handed 310
Helix 16
AB7
B
26 34Right-handed alpha
Helix 17
AB8
B
34 39Right-handed alpha
Helix 18
AB9
B
77 83Right-handed 310
Helix 19
AC1
B
90 104Right-handed alpha
Helix 20
AC2
B
118 129Right-handed alpha
Helix 21
AC3
B
146 158Right-handed alpha
Helix 22
AC4
B
159 163Right-handed 310
Helix 23
AC5
B
188 204Right-handed alpha
Helix 24
AC6
B
206 212Right-handed alpha
Helix 25
AC7
B
212 217Right-handed alpha
Helix 26
AC8
B
219 224Right-handed alpha
Helix 27
AC9
B
226 229Right-handed 310
Helix 28
AD1
B
230 241Right-handed alpha
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There are 4 sheets in PDB entry 8IN2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 141first strand
Strand 2
A
46 55parallel
Strand 3
A
165 171parallel
Strand 4
A
9 14parallel
Strand 5
A
262 266anti-parallel
Strand 6
A
245 250anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
110 112parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 141first strand
Strand 2
B
46 55parallel
Strand 3
B
165 171parallel
Strand 4
B
9 14parallel
Strand 5
B
262 266anti-parallel
Strand 6
B
245 250anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
110 112parallel
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